Sequence 1: | NP_001106796.1 | Gene: | Gria1 / 14799 | MGIID: | 95808 | Length: | 907 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_727328.1 | Gene: | Ir8a / 31867 | FlyBaseID: | FBgn0052704 | Length: | 936 | Species: | Drosophila melanogaster |
Alignment Length: | 886 | Identity: | 212/886 - (23%) |
---|---|---|---|
Similarity: | 362/886 - (40%) | Gaps: | 205/886 - (23%) |
- Green bases have known domain annotations that are detailed below.
Mouse 142 WQTFVYIYDADRGLSVLQRVLDTAAEKNWQVTAVNI-LTTTEEGYRMLFQDLEKKKERLVVVDCE 205
Mouse 206 S----------ERLNAILGQIVKLEKNGIGYHYILANL-GFMDIDLNKFKESGANVTGFQLVNYT 259
Mouse 260 DTIPARIMQQ------WRT-------SDARDH--TRVDWKRPK------YTSALTYDGV--KVM- 300
Mouse 301 AEAFQ-----------------SLRRQ-----RIDISRRGNAGDCLANPAVPWGQGIDIQRALQQ 343
Mouse 344 VRFEGLTGNVQFNEKGRRTNYTLHVIE---------MKHDGIRKIGY-------WNE-------- 384
Mouse 385 ---DDKF---VPAATDA---QAG------------------------GDNSSVQNRTYIVTTILE 416
Mouse 417 DPYVMLKKNANQFE------GNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWN 475
Mouse 476 GMVGELVYGRADVAVAPLTITLVREEVIDFSKPFM-SLGISIMIKKPQKSKPGVFSFLDPLAYEI 539
Mouse 540 WMCIVFAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQQGCD 604
Mouse 605 ISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGST 669
Mouse 670 KEFFRRSKIAV-----------------FEK--MWTY------------MKSAEPSVFVRTTEEG 703
Mouse 704 MIRV-RKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRGPVNLAVLKL 767
Mouse 768 SEQGVLDKLKSKWWYDKGECGSKDSGSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEFCYKS 832
Mouse 833 RSESKRMKGFCLIPQQSINEAIRTSTLPRNSGAGASGGSGS 873 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Gria1 | NP_001106796.1 | PBP1_iGluR_AMPA_GluR1 | 26..389 | CDD:107385 | 66/334 (20%) |
ANF_receptor | 37..372 | CDD:279440 | 60/296 (20%) | ||
PBP2_iGluR_AMPA_GluR1 | 406..787 | CDD:270447 | 121/419 (29%) | ||
Glutamate binding. /evidence=ECO:0000250 | 492..494 | 0/1 (0%) | |||
Lig_chan | 538..817 | CDD:278489 | 84/310 (27%) |