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Protein Alignment Gria1 and Ir7g

DIOPT Version :9

Sequence 1:	NP_001106796.1	Gene:	Gria1 / 14799	MGIID:	95808	Length:	907	Species:	Mus musculus
Sequence 2:	NP_001368933.1	Gene:	Ir7g / 31694	FlyBaseID:	FBgn0029968	Length:	607	Species:	Drosophila melanogaster

Alignment Length:	455	Identity:	81/455 - (17%)
Similarity:	154/455 - (33%)	Gaps:	117/455 - (25%)

- Green bases have known domain annotations that are detailed below.

Mouse   418 PYVMLKKNANQF----EGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMV 478
            |.::|.:..:.|    ||.....|....|..|:::.:.:|.:...:.|   ..::..|.....::
  Fly   213 PLIVLARKVSPFLDLDEGQRELRGLEGRLLQELSRRMNFSIQFSGLQD---QLKNRTTWTEKQLL 274

Mouse   479 GELVYGRADVAVAPLTITLVREEVIDFSK------PFMSLGI--SIMIKKPQKSKPGVFSFLDPL 535
            .:||..|    :|.|.|..||:. |.::.      |..|..:  .:::.....:...::||  |.
  Fly   275 QKLVQER----IAHLAIGYVRKR-IQYATNLTPVFPHYSNRVVGCLLLNAHNLTSLEIWSF--PF 332

Mouse   536 AYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQ 600
            ....|:|:||:::.:|.:..|..|                          |..:.|...|..:..
  Fly   333 QALTWICLVFSFLSISCLALLHXR--------------------------GAGDRLALVLAVYAA 371

Mouse   601 Q-GCDIS-PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGT 663
            . |..|. |...|.:::...|..|.||:.|.|:|.|...|..........:.:||   |...|..
  Fly   372 SLGLPIDPPERPSLQLLFASWLIFGLIVRSMYSALLFFILRYHLHQRLPGNLQDL---THGDYAA 433

Mouse   664 LEAGSTKEFFR-----------RSKIAVFEKMWTYMKS-----------AEPSVFVRTTEEGMIR 706
            :...:|.:..|           :|.|...|:....:::           :.|..|...:::.::.
  Fly   434 VMGRTTLQDLREVPSLQDLLGLKSVIVTSEREEEVLRTLDRCTLREGAGSHPLFFGLISQDALLH 498

Mouse   707 VRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRGPVNLAVLKLSEQG 771
            :.: :|..|........:.:||:                ..|...|.|.|...::..|:.:...|
  Fly   499 LTQ-RGHRAGAYHIIPQDVLEQQ----------------LAIYLQKHSHLASHLDHLVMSIRSVG 546

Mouse   772 VLDK----------LKSKWWYDKGECGSKDSGSKDKTSALSLSNVAGVFYILIGGLGLAMLVALI 826
            ::..          .:|::.|.:......|               ....|||..||.|..||..|
  Fly   547 LVHHWAGQMASERYFRSRFLYREKRIRQPD---------------LWAVYILTAGLYLLSLVVFI 596

Mouse 827 826
Fly 597 596

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.