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Protein Alignment Gria1 and Ir7b

DIOPT Version :9

Sequence 1:	NP_001106796.1	Gene:	Gria1 / 14799	MGIID:	95808	Length:	907	Species:	Mus musculus
Sequence 2:	NP_572410.2	Gene:	Ir7b / 31690	FlyBaseID:	FBgn0029965	Length:	655	Species:	Drosophila melanogaster

Alignment Length:	479	Identity:	86/479 - (17%)
Similarity:	172/479 - (35%)	Gaps:	108/479 - (22%)

- Green bases have known domain annotations that are detailed below.

Mouse   416 ED-PYVMLKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAW---NG 476
            || ||::.:.     :|:..:.|....|...:|:::.::.       |.|.....:..|.   :|
  Fly   218 EDMPYLVWRP-----DGSGSFVGIEGALLQFMAENLNFTV-------GLYWMNKEEVLATFDESG 270

Mouse   477 MVGELVYG-RADVAVAPLTITLVREEVIDFSKP---FMSLGISIMIKKPQKSKPGVFSFLD-PLA 536
            .:.:.::| .||.::............|.:|:.   |||   .||:....:|....:..|. |..
  Fly   271 RIFDEIFGHHADFSLGGFHFKPSAGSEIPYSQSTYYFMS---HIMLVTNLQSAYSAYEKLSFPFT 332

Mouse   537 YEIWMCIVFAYIGVSVVLFLVSRFSPYEW-HSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQ 600
            ..:|..|....|...::|.|:.|     | |..|...          |.:  :..|..::|..::
  Fly   333 PLLWRAIGLVLILACLLLMLLVR-----WRHHHELPR----------NPY--YELLVLTMGGNLE 380

Mouse   601 QGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLE 665
            ...  .|:....|:|...|.|.||::.|.|.:.:...|..:...:|.::..::..|    :.|::
  Fly   381 DRW--VPQRFPSRLVLLTWLFATLVLRSGYQSGMYQLLRQDTQRNPPQTISEVLAQ----HFTIQ 439

Mouse   666 AGSTKEFFRRSKIAVFE---KMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIE 727
            .....|  .|...::.|   :...|::.:|...|....::        .|..|.:...|..||..
  Fly   440 LAEVNE--ARILASLPELRPEQLVYLEGSELQSFPALAQQ--------SGSSARVAILTPYEYFG 494

Mouse   728 QRKPCDTMK-----VGGNLDSKGYGIATPKGSALRGPVNLAVLKLSEQGVLDKLKSKWWY----- 782
            ..:....|.     |...:.::.......:.|.|.|.:|..:......|.|:.     |.
  Fly   495 YFRKVHPMSRRLHLVRERIYTQQLAFYVRRHSHLVGVLNKQIQHAHTHGFLEH-----WTRQYVS 554

Mouse   783 ---DKGECGSKDSGSKDKT------------------------SALSLSNVAGVFYILI-GGLGL 819
               :|.|..::.:.:...|                        :.||:..:|.:|:::: ..||
  Fly   555 AVDEKDESVARIASTSYSTLDGIDGDPSLSESEEDQQVAPVRQNVLSMRELAALFWLILWANLG- 618

Mouse   820 AMLVALIEFC---YKSRSESKRMK 840
            |::|.::|..   .|.|...::||
  Fly   619 AVVVFVLELLLPRIKLRKILRKMK 642

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.