DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grb10 and pico

DIOPT Version :9

Sequence 1:NP_001357532.1 Gene:Grb10 / 14783 MGIID:103232 Length:621 Species:Mus musculus
Sequence 2:NP_608363.1 Gene:pico / 33003 FlyBaseID:FBgn0261811 Length:1162 Species:Drosophila melanogaster


Alignment Length:521 Identity:122/521 - (23%)
Similarity:204/521 - (39%) Gaps:121/521 - (23%)


- Green bases have known domain annotations that are detailed below.


Mouse    17 NMQSDTDTAPLLEDGQHASNQGAASSSRGQPQASPRQKMQRSQPVHILRRLQEEDQQLRTASLPA 81
            |..:.:||..||      |::.:|||:....|...:|:.|..|  |......::.||.       
  Fly   270 NDSAFSDTVSLL------SSESSASSNTSLQQQQQQQQQQHHQ--HQQHHQHQQQQQK------- 319

Mouse    82 IPNPFPELTGAAPGSPPSVAPSSLPPPPSQPPAKHCGRCEKWIPGENTRGNGKRKIWRWQFPPGF 146
                 |:|.||                   ....|.|     :.|::                |.
  Fly   320 -----PQLAGA-------------------EKLHHHG-----VHGQH----------------GG 339

Mouse   147 QLSKLTRPGLWTKTTARFSKKQPKNQCPTDTVNPVARMPTSQMEKLRLRK-DVKVFSEDGTSKVV 210
            |           ::.|....|..|.|           :...::|...:|: .||.|:.||.||.:
  Fly   340 Q-----------QSGANSITKADKIQ-----------LALHKLESAPIRRLFVKAFTSDGASKSL 382

Mouse   211 EILTDMTARDLCQLLVYKSHCVDDNSWTLVEHHPQLGLERCLEDHEIVVQVESTMPSE--SKFLF 273
            .:...|....:.:||..|:|....::|.||||...|.:||..||||::|....|..|:  ::.||
  Fly   383 LVDERMGCGHVTRLLADKNHVQMQSNWALVEHLGDLQMERLFEDHELLVDNLMTWHSDAGNRVLF 447

Mouse   274 RKNYAKYEFFKNPVNFFP-DQMVNWCQQSNGGQAQLLQNFLNTSSCPEIQGFLQVKEVGRKSWKK 337
            ::...|...|..|..:.| .||...||.....:..||..|.::.:..::.|.|.:|...:|.||:
  Fly   448 QQRPDKVTLFLRPELYLPGPQMAPGCQHDEQTRQMLLDEFFDSHNQLQMDGPLYMKADPKKGWKR 512

Mouse   338 LYVCLRRSGLYYSTKGTSKEPRHLQLLADLEESSIFYLIAGKKQYNAPNEHGMCIK---PNKAKT 399
            .:..||.|||||..|..:|..|.|..|......:::..:..:|::.:|.::....|   .:....
  Fly   513 YHFVLRSSGLYYFPKEKTKNTRDLACLNLFHGHNVYTGLGWRKKWKSPTDYTFGFKAVGDSSLGK 577

Mouse   400 EMKELRLLCAEDEQIRTCWMTAFRLLKYGMLLYQNYRIPQRKGLPPPFNAPMRSVSENSLVAMDF 464
            ..:.|::|||||......|:||.|:.|||..|:.::                :|:.|:..::.| 
  Fly   578 SCRSLKMLCAEDLPTLDRWLTAIRVCKYGKQLWDSH----------------KSLLEDLCLSRD- 625

Mouse   465 SGQIGRVIDNPAEAQSAALEEGHAWRKRSTRMNILSSQSPLHPSTLNAVIHRTQHWFHGRISREE 529
                           .|..:...|...||..::.:||..|....::::.|....:...||.||..
  Fly   626 ---------------DAVSQSSFAASMRSESISSISSAVPSQCGSVSSAISSMSNSTSGRTSRAS 675

Mouse   530 S 530
            |
  Fly   676 S 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grb10NP_001357532.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..118 21/100 (21%)
RA_GRB10 197..285 CDD:340558 31/89 (35%)
PH_APBB1IP 314..436 CDD:269961 35/124 (28%)
BPS 453..494 CDD:312490 6/40 (15%)
SH2_Grb10 514..621 CDD:198278 6/17 (35%)
picoNP_608363.1 GRB7_RA 364..451 CDD:176382 30/86 (35%)
PH_APBB1IP 489..614 CDD:269961 35/140 (25%)
PH 494..605 CDD:278594 31/110 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847711
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3751
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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