DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ZNF417 and LOC101731242

DIOPT Version :9

Sequence 1:XP_011524775.1 Gene:ZNF417 / 147687 HGNCID:20646 Length:643 Species:Homo sapiens
Sequence 2:XP_017952890.2 Gene:LOC101731242 / 101731242 -ID:- Length:696 Species:Xenopus tropicalis


Alignment Length:718 Identity:188/718 - (26%)
Similarity:280/718 - (38%) Gaps:264/718 - (36%)


- Green bases have known domain annotations that are detailed below.


Human    78 IIQGTVTF--EDVAVNFSQEEWCLLSEAQRCLYRDVMLENLALISSLGCWCGSKDEEAPCKQRIS 140
            ::.|.|..  |||::.||.|||..: :..:.|||:                |.|:||        
 Frog    57 LLTGEVAIRCEDVSIYFSLEEWEYI-KGNKALYRE----------------GIKEEE-------- 96

Human   141 VQRESQSRTPRAG-VSPKKAHPCEMCGLILEDVFHFADHQETHHKQKLNRSGACGKNLDDTAYLH 204
              .|.|...|..| ...|:..|.::.|.:.             :..:.::.||.|          
 Frog    97 --EEPQQLRPLDGEYEDKREIPADLGGTLC-------------YNNEPSKIGAEG---------- 136

Human   205 QHQKQHIGEKFYRKSVREASFVKKRKLR------VSQEPFVFREFGKDVLPSSGLCQEAAAVEK- 262
                              |.|...|.|.      ..|.|.           ::|:.:|||:.|: 
 Frog   137 ------------------ADFCADRNLTNPEISPAEQPPL-----------ANGIKEEAASWEEG 172

Human   263 ----------------TDSET--------------------------MHGPPFQEGKT--NYSCG 283
                            ||:.|                          :|.....:..|  .|:|.
 Frog   173 NQSDCSIIPLTEQRQGTDTPTPIMAHTFNKSSDVNHNRFDKNIHTNALHAAHLAKHPTQGTYNCP 237

Human   284 KRTKAFSTKHSVIPHQKLFTRDGCYVCSDCGKSFSRYVSFSNHQRDHTAKGP------------- 335
            ...|.|:..:..|.|.:..|....:.||:|||||:|..:.:.|:|.|:...|             
 Frog   238 TCHKPFTKSYDFIRHLRTHTGVKPFSCSECGKSFTRRFNLNVHRRTHSGNIPQGQQQTAADSVKG 302

Human   336 ----------------------------------------------------------------- 335
                                                                             
 Frog   303 ATALHDGGNQSGCSLNSFMKQTWGTDTPTPVMGSSLGNSSADNSISSGMRGSAPALWKEGNQSDC 367

Human   336 --------------------------------YDC---------------------GECGKSYSR 347
                                            |:|                     .||..:::.
 Frog   368 SINPLTEQIQGTDTPTPIMGCSLSNSSAETKTYECDKNINSNGSHESPVKNLKSTSDECHFAFTN 432

Human   348 KSSLIQHQRVHTGKTAYPCEECGKSFSQKGSLISHQRVHTGERPYECREYGKSFGQKGNLIQHQQ 412
            :..|::|:|.|||:..:||..|||.|::...|..|:.||:||:|:.|.:.||.|..:.||..|.:
 Frog   433 RRDLVRHERTHTGEKPFPCPVCGKCFARCSDLNVHKGVHSGEKPFCCSDCGKCFTHRANLAAHVK 497

Human   413 GHTGERAYHCGECGKSFRQKFCFINHQRVHTGERPYKCGECGKSFGQKGNLVQHQRGHTGERPYE 477
            .||..:.:.|.:|||.|:::.....||.|||||:|:.|.||||||.::.|...|...||..:.:.
 Frog   498 THTDLKPFSCDKCGKCFKRRSHLKGHQIVHTGEKPFSCSECGKSFAKRSNFTAHCSTHTDGKTFT 562

Human   478 CKECGKSFRYRSHLTEHQRLHTGERPYNCRECGKLFNRKYHLLVHERVHTGERPYACEVCGKLFG 542
            |.:|||.|:||:....|||||.||.|:.|.||||.|.|:.||:||.:.||||:|:.|..|||.|.
 Frog   563 CSDCGKGFKYRADFKVHQRLHLGENPFPCSECGKSFTRRSHLIVHLKTHTGEKPFTCPECGKSFT 627

Human   543 NKNCVTIHQRIHTGERPYECNECGKSFLSSSALHVHKRVHSGQKPYKCSECGKSFAECSSLIKHR 607
            .::.:.||:|:||||||:.|.||||.|...|.|:||:|.|:|::|:.|.||||.|.:.:.|..||
 Frog   628 QRSDMNIHRRLHTGERPFPCPECGKCFSQFSYLNVHRRTHTGERPFSCDECGKCFKQRTHLNVHR 692

Human   608 RIH 610
            :||
 Frog   693 KIH 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF417XP_011524775.1 KRAB 83..138 CDD:214630 16/56 (29%)
KRAB 83..122 CDD:279668 12/40 (30%)
C2H2 Zn finger 162..182 CDD:275368 1/19 (5%)
C2H2 Zn finger 190..210 CDD:275368 3/19 (16%)
C2H2 Zn finger 282..302 CDD:275368 5/19 (26%)
C2H2 Zn finger 310..330 CDD:275368 10/19 (53%)
C2H2 Zn finger 338..358 CDD:275368 6/40 (15%)
COG5048 <341..636 CDD:227381 123/270 (46%)
zf-C2H2 364..386 CDD:278523 8/21 (38%)
C2H2 Zn finger 366..386 CDD:275368 7/19 (37%)
C2H2 Zn finger 394..411 CDD:275368 6/16 (38%)
C2H2 Zn finger 422..442 CDD:275368 7/19 (37%)
zf-H2C2_2 437..457 CDD:290200 13/19 (68%)
C2H2 Zn finger 450..470 CDD:275368 9/19 (47%)
zf-H2C2_2 462..487 CDD:290200 9/24 (38%)
C2H2 Zn finger 478..498 CDD:275368 10/19 (53%)
zf-H2C2_2 490..515 CDD:290200 14/24 (58%)
C2H2 Zn finger 506..526 CDD:275368 11/19 (58%)
zf-H2C2_2 518..541 CDD:290200 13/22 (59%)
C2H2 Zn finger 534..554 CDD:275368 8/19 (42%)
zf-H2C2_2 550..571 CDD:290200 14/20 (70%)
C2H2 Zn finger 562..582 CDD:275368 11/19 (58%)
zf-H2C2_2 577..598 CDD:290200 11/20 (55%)
C2H2 Zn finger 590..610 CDD:275368 9/19 (47%)
zf-H2C2_2 602..625 CDD:290200 5/9 (56%)
C2H2 Zn finger 618..638 CDD:275368
LOC101731242XP_017952890.2 KRAB_A-box 64..>93 CDD:413388 12/45 (27%)
COG5048 233..636 CDD:227381 112/402 (28%)
C2H2 Zn finger 236..256 CDD:275368 5/19 (26%)
C2H2 Zn finger 264..284 CDD:275368 10/19 (53%)
C2H2 Zn finger 424..443 CDD:275368 5/18 (28%)
C2H2 Zn finger 451..471 CDD:275368 7/19 (37%)
C2H2 Zn finger 479..499 CDD:275368 7/19 (37%)
C2H2 Zn finger 507..527 CDD:275368 7/19 (37%)
C2H2 Zn finger 535..555 CDD:275368 9/19 (47%)
C2H2 Zn finger 563..583 CDD:275368 10/19 (53%)
C2H2 Zn finger 591..611 CDD:275368 11/19 (58%)
C2H2 Zn finger 619..639 CDD:275368 8/19 (42%)
zf-H2C2_2 635..656 CDD:404364 14/20 (70%)
C2H2 Zn finger 647..667 CDD:275368 11/19 (58%)
zf-H2C2_2 659..684 CDD:404364 13/24 (54%)
C2H2 Zn finger 675..695 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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