DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZNF417 and LOC100488006

DIOPT Version :9

Sequence 1:XP_011524775.1 Gene:ZNF417 / 147687 HGNCID:20646 Length:643 Species:Homo sapiens
Sequence 2:XP_002937452.2 Gene:LOC100488006 / 100488006 -ID:- Length:383 Species:Xenopus tropicalis


Alignment Length:248 Identity:130/248 - (52%)
Similarity:165/248 - (66%) Gaps:2/248 - (0%)


- Green bases have known domain annotations that are detailed below.


Human   309 VCSDCGKSFSRYVS-FSNHQRDHTAKGPYDCGECGKSYSRKSSLIQHQRVHTGKTAYPCEECGKS 372
            ||.|||:||| ||| ...|:|.||.:.|::||.|||.::||.||:.|:|:|||:..|||.:|||.
 Frog   123 VCIDCGRSFS-YVSHLIIHRRSHTGEKPFECGMCGKCFARKCSLVIHERIHTGERPYPCPDCGKR 186

Human   373 FSQKGSLISHQRVHTGERPYECREYGKSFGQKGNLIQHQQGHTGERAYHCGECGKSFRQKFCFIN 437
            |:...:|.:|:|:|||||||.|.|.||||....:|..|.:.||||:.|.|.:|||:|......:.
 Frog   187 FTSSATLTTHKRIHTGERPYICWECGKSFTSNSSLFLHNRTHTGEKPYECKQCGKTFSCSSALVT 251

Human   438 HQRVHTGERPYKCGECGKSFGQKGNLVQHQRGHTGERPYECKECGKSFRYRSHLTEHQRLHTGER 502
            |.|.||||:||.|.||||||.....|::||..||||..|.|..|||.|...|:|..|||.|||||
 Frog   252 HTRTHTGEKPYTCAECGKSFFDNSRLLKHQATHTGEWAYMCTICGKGFTCISNLNVHQRSHTGER 316

Human   503 PYNCRECGKLFNRKYHLLVHERVHTGERPYACEVCGKLFGNKNCVTIHQRIHT 555
            |::|.:|||.|....:|:.|:..|||||||.|.:|||.|..|..|..||:|||
 Frog   317 PFSCGQCGKSFTNNSYLVRHQTTHTGERPYPCPICGKTFTRKGHVVTHQKIHT 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF417XP_011524775.1 KRAB 83..138 CDD:214630
KRAB 83..122 CDD:279668
C2H2 Zn finger 162..182 CDD:275368
C2H2 Zn finger 190..210 CDD:275368
C2H2 Zn finger 282..302 CDD:275368
C2H2 Zn finger 310..330 CDD:275368 12/20 (60%)
C2H2 Zn finger 338..358 CDD:275368 11/19 (58%)
COG5048 <341..636 CDD:227381 112/215 (52%)
zf-C2H2 364..386 CDD:278523 10/21 (48%)
C2H2 Zn finger 366..386 CDD:275368 8/19 (42%)
C2H2 Zn finger 394..411 CDD:275368 7/16 (44%)
C2H2 Zn finger 422..442 CDD:275368 7/19 (37%)
zf-H2C2_2 437..457 CDD:290200 13/19 (68%)
C2H2 Zn finger 450..470 CDD:275368 10/19 (53%)
zf-H2C2_2 462..487 CDD:290200 13/24 (54%)
C2H2 Zn finger 478..498 CDD:275368 10/19 (53%)
zf-H2C2_2 490..515 CDD:290200 15/24 (63%)
C2H2 Zn finger 506..526 CDD:275368 7/19 (37%)
zf-H2C2_2 518..541 CDD:290200 13/22 (59%)
C2H2 Zn finger 534..554 CDD:275368 9/19 (47%)
zf-H2C2_2 550..571 CDD:290200 5/6 (83%)
C2H2 Zn finger 562..582 CDD:275368
zf-H2C2_2 577..598 CDD:290200
C2H2 Zn finger 590..610 CDD:275368
zf-H2C2_2 602..625 CDD:290200
C2H2 Zn finger 618..638 CDD:275368
LOC100488006XP_002937452.2 C2H2 Zn finger 124..144 CDD:275368 12/20 (60%)
zf-H2C2_2 136..161 CDD:290200 10/24 (42%)
C2H2 Zn finger 152..172 CDD:275368 11/19 (58%)
zf-H2C2_2 164..189 CDD:290200 14/24 (58%)
COG5048 <177..327 CDD:227381 78/149 (52%)
C2H2 Zn finger 180..200 CDD:275368 8/19 (42%)
zf-H2C2_2 193..217 CDD:290200 16/23 (70%)
C2H2 Zn finger 208..228 CDD:275368 8/19 (42%)
zf-H2C2_2 220..245 CDD:290200 12/24 (50%)
C2H2 Zn finger 236..256 CDD:275368 7/19 (37%)
zf-H2C2_2 248..271 CDD:290200 13/22 (59%)
C2H2 Zn finger 264..284 CDD:275368 10/19 (53%)
C2H2 Zn finger 292..312 CDD:275368 10/19 (53%)
zf-H2C2_2 304..329 CDD:290200 15/24 (63%)
C2H2 Zn finger 320..340 CDD:275368 7/19 (37%)
zf-H2C2_2 332..357 CDD:290200 14/24 (58%)
C2H2 Zn finger 348..368 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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