DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCBE1 and NimC2

DIOPT Version :10

Sequence 1:XP_016881046.1 Gene:CCBE1 / 147372 HGNCID:29426 Length:435 Species:Homo sapiens
Sequence 2:NP_788047.1 Gene:NimC2 / 34818 FlyBaseID:FBgn0028939 Length:701 Species:Drosophila melanogaster


Alignment Length:347 Identity:84/347 - (24%)
Similarity:117/347 - (33%) Gaps:99/347 - (28%)


- Green bases have known domain annotations that are detailed below.


Human    21 GPLLLLLALGHTWTYREEPEDGDREICSESKIATTKYPCL---KSSGELTTCYRKKCC---KGY- 78
            |||     :|.|   |.|...|..::|.:..|......|:   ...|....|.....|   ||| 
  Fly    47 GPL-----VGRT---RTETYLGFTDVCCDGYIRDENNECVPLCNDCGASGKCLLPNVCLCGKGYV 103

Human    79 -KFVLGQCIPEDYDVCAEAPCEQQCTDNFGRVL----CTCYPGYRYDRERHRKREKPYCLDIDEC 138
             :...|.|.||         |.:.|.:  |:.:    |.|..|:|:........| |.|  :::|
  Fly   104 SRKDHGHCEPE---------CSESCVN--GKCVAPDECECLAGHRFVNGSQTACE-PIC--VEDC 154

Human   139 ASSNGTLCAHICINTLGSYRCECREGYIREDDGKTCT--------RGD-KYPND----TGHEKSE 190
            |  ||.     |:.|   .:|.|..||.|::..|.|.        .|| ..||:    .|||:  
  Fly   155 A--NGR-----CLET---GKCLCNNGYQRDEKLKKCVPICQDACYHGDCVAPNECRCHPGHEQ-- 207

Human   191 NMVKAGT-------CCATCKEFYQMKQTVLQLKQKIALLPNNAADLGKYITGDKVLASNTY-LPG 247
               :.|.       |.:.|...|.....|.            |..:| |...|..|||... :..
  Fly   208 ---RLGVPWICDPICSSGCANGYCQGAEVC------------ACKMG-YAHKDNTLASGCEPVCN 256

Human   248 PPGLPGGQGPPGE--CGRGHRRVITNRKSLPKAHIC-----WGLDNVLQLPSRRNKAHQDQREA- 304
            ||...|....||.  |..||.....:|      |.|     .|.:|.......|.:.|:...:. 
  Fly   257 PPCTNGTCISPGHCACSEGHVFAEGSR------HECVPSCRSGCENGYCSSPGRCECHEGFEKTS 315

Human   305 --QASPVCQALLGSPAHGAQWD 324
              :.||.|:...|..:..|..|
  Fly   316 PHRCSPTCRPGCGQNSRCAAPD 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCBE1XP_016881046.1 EGF_CA 134..175 CDD:214542 12/40 (30%)
NimC2NP_788047.1 None

Return to query results.
Submit another query.