DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCBE1 and lag-2

DIOPT Version :10

Sequence 1:XP_016881046.1 Gene:CCBE1 / 147372 HGNCID:29426 Length:435 Species:Homo sapiens
Sequence 2:NP_503877.1 Gene:lag-2 / 178755 WormBaseID:WBGene00002246 Length:402 Species:Caenorhabditis elegans


Alignment Length:169 Identity:36/169 - (21%)
Similarity:53/169 - (31%) Gaps:47/169 - (27%)


- Green bases have known domain annotations that are detailed below.


Human    17 GRSLGPLLLLLALGHTWTYREEPEDGDREICSESKIATTKYPCLKSSGELTTCYRKKCCKGYKFV 81
            |:.||..:          ||:....|..:........||....|..:.|:|      |.:.|   
 Worm    83 GQPLGDRI----------YRKVQFSGTNQPWINDTFTTTSGISLSVATEVT------CARNY--- 128

Human    82 LGQCIPEDYDVCAEAPCEQQCTDNFGRVLCTCYPGYRYDRERHRKREKPYC---LDIDECASSNG 143
            .|.......|........::| |..||:.|..  |:.          .|:|   :|..:|:..|.
 Worm   129 FGNRCENFCDAHLAKAARKRC-DAMGRLRCDI--GWM----------GPHCGQAVDPRKCSCEND 180

Human   144 TLCAHICI-----NTLGSYR---CECREGYIREDDGKTC 174
            .:|....|     |...|..   |||..|:    .|..|
 Worm   181 GICVSSMIHPSQPNQTSSNEQLICECTNGF----TGTRC 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCBE1XP_016881046.1 EGF_CA 134..175 CDD:214542 13/49 (27%)
lag-2NP_503877.1 DSL 103..166 CDD:128366 16/84 (19%)

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