DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gnb3 and Gbeta13F

DIOPT Version :9

Sequence 1:NP_038558.1 Gene:Gnb3 / 14695 MGIID:95785 Length:340 Species:Mus musculus
Sequence 2:NP_001303567.1 Gene:Gbeta13F / 32544 FlyBaseID:FBgn0001105 Length:340 Species:Drosophila melanogaster


Alignment Length:340 Identity:262/340 - (77%)
Similarity:297/340 - (87%) Gaps:0/340 - (0%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MGEMEQLRQEAEQLKKQIADARKACADITLAELVSGLEVVGRVQMRTRRTLRGHLAKIYAMHWAT 65
            |.|::.||||||.||..|.|||||..|.:|.:..:.||.:||:||||||||||||||||||||..
  Fly     1 MNELDSLRQEAESLKNAIRDARKAACDTSLLQAATSLEPIGRIQMRTRRTLRGHLAKIYAMHWGN 65

Mouse    66 DSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYNLKSRE 130
            ||:.||||||||||||||::||||||||||||||||||||||||::||||||||||||||||:||
  Fly    66 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNMCSIYNLKTRE 130

Mouse   131 GNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPD 195
            |||:|||||..|.||||||||||||.|||||||.:|.|||||||.|.|.|:|||||.|:|:::|.
  Fly   131 GNVRVSRELPGHGGYLSCCRFLDDNQIVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSLAPQ 195

Mouse   196 YKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQE 260
            .|.|:||||||||||||:|||.|:|||.||||||||:.|||||:|..||||||:|||||:|||||
  Fly   196 CKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATGSDDATCRLFDIRADQE 260

Mouse   261 LTAYSQESIICGITSVAFSLSGRLLFAGYDDFNCNVWDSLKCERVGILSGHDNRVSCLGVTADGM 325
            |..||.::|||||||||||.|||||.||||||||||||::|.||.|||:||||||||||||.:||
  Fly   261 LAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMKAERSGILAGHDNRVSCLGVTENGM 325

Mouse   326 AVATGSWDSFLKIWN 340
            |||||||||||::||
  Fly   326 AVATGSWDSFLRVWN 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gnb3NP_038558.1 WD40 48..340 CDD:238121 234/291 (80%)
WD40 <49..340 CDD:225201 233/290 (80%)
WD 1 53..83 25/29 (86%)
WD40 repeat 58..95 CDD:293791 30/36 (83%)
WD 2 95..125 27/29 (93%)
WD40 repeat 101..141 CDD:293791 35/39 (90%)
WD 3 141..170 22/28 (79%)
WD40 repeat 146..181 CDD:293791 27/34 (79%)
WD 4 182..212 20/29 (69%)
WD40 repeat 188..223 CDD:293791 23/34 (68%)
WD 5 224..254 23/29 (79%)
WD40 repeat 229..265 CDD:293791 26/35 (74%)
WD 6 268..298 26/29 (90%)
WD40 repeat 273..309 CDD:293791 29/35 (83%)
WD 7 310..340 25/29 (86%)
WD40 repeat 315..339 CDD:293791 20/23 (87%)
Gbeta13FNP_001303567.1 WD40 48..340 CDD:238121 234/291 (80%)
WD40 repeat 58..95 CDD:293791 30/36 (83%)
WD40 repeat 101..141 CDD:293791 35/39 (90%)
WD40 repeat 146..181 CDD:293791 27/34 (79%)
WD40 repeat 188..223 CDD:293791 23/34 (68%)
WD40 repeat 229..265 CDD:293791 26/35 (74%)
WD40 repeat 273..309 CDD:293791 29/35 (83%)
WD40 repeat 315..339 CDD:293791 20/23 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 66 1.000 Domainoid score I9873
eggNOG 1 0.900 - - E1_KOG0286
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54867
OrthoDB 1 1.010 - - D313727at33208
OrthoFinder 1 1.000 - - FOG0000271
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101247
Panther 1 1.100 - - O PTHR19850
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R475
SonicParanoid 1 1.000 - - X182
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.820

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