DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gnb2 and Gbeta13F

DIOPT Version :9

Sequence 1:NP_034442.1 Gene:Gnb2 / 14693 MGIID:95784 Length:340 Species:Mus musculus
Sequence 2:NP_001303567.1 Gene:Gbeta13F / 32544 FlyBaseID:FBgn0001105 Length:340 Species:Drosophila melanogaster


Alignment Length:340 Identity:277/340 - (81%)
Similarity:309/340 - (90%) Gaps:0/340 - (0%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MSELEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGT 65
            |:||:.||||||.|:|.|||||||..|::|.|....|:|:||||||||||||||||||||||||.
  Fly     1 MNELDSLRQEAESLKNAIRDARKAACDTSLLQAATSLEPIGRIQMRTRRTLRGHLAKIYAMHWGN 65

Mouse    66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTRE 130
            |||.|||||||||||:|||:||||||||||||||||||||||||::||||||||:||||:|||||
  Fly    66 DSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNMCSIYNLKTRE 130

Mouse   131 GNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPD 195
            ||||||||||||.||||||||||||||:|||||.:|.|||||||.|...|.||:||||:|||||.
  Fly   131 GNVRVSRELPGHGGYLSCCRFLDDNQIVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSLAPQ 195

Mouse   196 GRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQE 260
            .:||||||||||.||||:|:.:|:|||.|||||||||.|||||.||.||||||||||||:|||||
  Fly   196 CKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATGSDDATCRLFDIRADQE 260

Mouse   261 LLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGM 325
            |.|||||||||||||||||:|||||||||||||||:||.||.:|:|:||||||||||||||::||
  Fly   261 LAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMKAERSGILAGHDNRVSCLGVTENGM 325

Mouse   326 AVATGSWDSFLKIWN 340
            |||||||||||::||
  Fly   326 AVATGSWDSFLRVWN 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gnb2NP_034442.1 WD40 48..340 CDD:238121 245/291 (84%)
WD 1 53..83 26/29 (90%)
WD40 repeat 58..95 CDD:293791 32/36 (89%)
WD 2 95..125 26/29 (90%)
WD40 repeat 101..141 CDD:293791 35/39 (90%)
WD 3 141..170 23/28 (82%)
WD40 repeat 146..181 CDD:293791 26/34 (76%)
WD 4 182..212 23/29 (79%)
WD40 repeat 188..223 CDD:293791 24/34 (71%)
WD 5 224..254 26/29 (90%)
WD40 repeat 229..265 CDD:293791 30/35 (86%)
WD 6 268..298 27/29 (93%)
WD40 repeat 273..309 CDD:293791 28/35 (80%)
WD 7 310..340 25/29 (86%)
WD40 repeat 315..339 CDD:293791 20/23 (87%)
Gbeta13FNP_001303567.1 WD40 48..340 CDD:238121 245/291 (84%)
WD40 repeat 58..95 CDD:293791 32/36 (89%)
WD40 repeat 101..141 CDD:293791 35/39 (90%)
WD40 repeat 146..181 CDD:293791 26/34 (76%)
WD40 repeat 188..223 CDD:293791 24/34 (71%)
WD40 repeat 229..265 CDD:293791 30/35 (86%)
WD40 repeat 273..309 CDD:293791 28/35 (80%)
WD40 repeat 315..339 CDD:293791 20/23 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849165
Domainoid 1 1.000 66 1.000 Domainoid score I9873
eggNOG 1 0.900 - - E1_KOG0286
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 609 1.000 Inparanoid score I921
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54867
OrthoDB 1 1.010 - - D313727at33208
OrthoFinder 1 1.000 - - FOG0000271
OrthoInspector 1 1.000 - - otm43518
orthoMCL 1 0.900 - - OOG6_101247
Panther 1 1.100 - - O PTHR19850
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R475
SonicParanoid 1 1.000 - - X182
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.800

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