DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gnat1 and Galphaq

DIOPT Version :9

Sequence 1:NP_032166.1 Gene:Gnat1 / 14685 MGIID:95778 Length:350 Species:Mus musculus
Sequence 2:NP_725192.2 Gene:Galphaq / 36384 FlyBaseID:FBgn0004435 Length:396 Species:Drosophila melanogaster


Alignment Length:392 Identity:171/392 - (43%)
Similarity:230/392 - (58%) Gaps:52/392 - (13%)


- Green bases have known domain annotations that are detailed below.


Mouse     5 ASAEEKHSRELEKKLKEDAEKDARTVKLLLLGAGESGKSTIVKQMKIIHQDGYSLEECLEFIAII 69
            |..:::.::|:||:|:.|.....|.:||||||.|||||||.:|||:|||..|||.|:...:|.::
  Fly     9 AKEQKRINQEIEKQLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGYIKLV 73

Mouse    70 YGNTLQSILAIVRAMTTLNIQYGDSARQDDARKLMHM-ADTIEEGTMPKEMSDIIQRLWKDSGIQ 133
            :.|...::.::::||..|.|.||.....:.|..:|.: .:|:.  |......:.|:.||.|:|||
  Fly    74 FQNIFMAMQSMIKAMDMLKISYGQGEHSELADLVMSIDYETVT--TFEDPYLNAIKTLWDDAGIQ 136

Mouse   134 ACFDRASEYQLNDSAGYYLSDLERLVTPGYVPTEQDVLRSRVKTTGIIETQFSFKDLN------- 191
            .|:||..||||.|||.|||.||:|:..|.|:|||||:||.||.||||||..|..:::.       
  Fly   137 ECYDRRREYQLTDSAKYYLKDLDRVAQPAYLPTEQDILRVRVPTTGIIEYPFDLEEIRFSYLSDL 201

Mouse   192 ------------------------------------FRMFDVGGQRSERKKWIHCFEGVTCIIFI 220
                                                |||.|||||||||:|||||||.||.|||:
  Fly   202 ARIEQADYLPTEQDILRARVPTTGILEYPFDLDGIVFRMVDVGGQRSERRKWIHCFENVTSIIFL 266

Mouse   221 AALSAYDMVLVEDDEVNRMHESLHLFNSICNHRYFATTSIVLFLNKKDVFSEKIKKAHLSICFPD 285
            .|||.||.:|.|.|..|||.||..||.:|..:.:|..:|::|||||||:..|||..:||...||:
  Fly   267 VALSEYDQILFESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPE 331

Mouse   286 YDGPNTYED---AGNYIKVQFLELNMRRDVKEIYSHMTCATDTQNVKFVFDAVTDIIIKENLKDC 347
            ||||.  .|   |..:|...|::||...: |.||||.||||||:|:|.||.||.|.|::..||:.
  Fly   332 YDGPQ--RDAITAREFILRMFVDLNPDSE-KIIYSHFTCATDTENIKLVFCAVKDTIMQNALKEF 393

Mouse   348 GL 349
            .|
  Fly   394 NL 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gnat1NP_032166.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 5/15 (33%)
G-alpha 30..344 CDD:206639 161/360 (45%)
G1 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 31..44 11/12 (92%)
G2 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 169..177 5/7 (71%)
G3 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 192..201 7/8 (88%)
G4 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 261..268 5/6 (83%)
G5 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 320..325 4/4 (100%)
Interaction with RHO. /evidence=ECO:0000250|UniProtKB:P04695 340..350 3/10 (30%)
GalphaqNP_725192.2 G-alpha 34..390 CDD:206639 161/360 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54330
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000052
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X53
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

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