DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slc6a9 and GlyT

DIOPT Version :9

Sequence 1:NP_001342104.1 Gene:Slc6a9 / 14664 MGIID:95760 Length:652 Species:Mus musculus
Sequence 2:NP_611836.2 Gene:GlyT / 37772 FlyBaseID:FBgn0034911 Length:1188 Species:Drosophila melanogaster


Alignment Length:633 Identity:293/633 - (46%)
Similarity:410/633 - (64%) Gaps:38/633 - (6%)


- Green bases have known domain annotations that are detailed below.


Mouse     2 IGGDTRAASAHPGMASAQGPVATPSPEQNGAV------------PSEATKKDQNLTRGNWGNQIE 54
            :|..:::.||..|.....|.|..||...:|..            |......:....||.|..:.:
  Fly     1 MGQSSKSGSAGVGGVGGGGGVVCPSTAISGCASGTALIQLDATGPGAGGAGESEHERGTWTGRFD 65

Mouse    55 FVLTSVGYAVGLGNVWRFPYLCYRNGGGAFMFPYFIMLIFCGIPLFFMELSFGQFASQGCLGVW- 118
            |:|:.:||:||||||||||||||.||||||:.|:.|||:..|:||.||||||||:|:.|.:.|: 
  Fly    66 FLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTIMLVIAGLPLMFMELSFGQYAALGPVAVYR 130

Mouse   119 RISPMFKGVGYGMMVVSTYIGIYYNVVICIAFYYFFSSMTHVLPWAYCNNPWNTPDCAGV--LDA 181
            |..|:|:|:|.||::||..:.:|||::|....:|.|:|...||||..|...|:|..|...  .|.
  Fly   131 RFCPLFRGLGTGMILVSAIVMLYYNLIIAWTIFYMFASFAPVLPWQNCEPAWSTKYCFSYAQADQ 195

Mouse   182 SNLTNG--------SRPAALSGNLSHLFNYTLQRTSPSEEYWRLYVLKLSDDIGNFGEVRLPLLG 238
            ...|||        :..:|...|::.|....|:| .|:|||:..:||.||..|...|.::|.|..
  Fly   196 CEATNGTYYLRTCHNATSAAENNITTLALGALKR-PPAEEYFNNFVLGLSKGIEETGSIKLSLAA 259

Mouse   239 CLGVSWVVVFLCLIRGVKSSGKVVYFTATFPYVVLTILFVRGVTLEGAFTGIMYYLTPQWDKILE 303
            ||.::|.:|||||.:||:||||||||||.||||||.|||||||||.||.|||::||||.|.::..
  Fly   260 CLFLAWTIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFVRGVTLPGASTGILFYLTPDWKQLAN 324

Mouse   304 AKVWGDAASQIFYSLGCAWGGLITMASYNKFHNNCYRDSVIISITNCATSVYAGFVIFSILGFMA 368
            |:||||||.|||::|..|||||||::|||||.||||:||:|::..|.|||.:||.|||||:||:|
  Fly   325 AQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYKDSLIVAFCNIATSFFAGLVIFSIIGFLA 389

Mouse   369 NHLGVDVSRVADHGPGLAFVAYPEALTLLPISPLWSLLFFFMLILLGLGTQFCLLETLVTAIVDE 433
            :.|.|||.:|.|.|.||||:.|||.:|.||:||:|::|||.||:.|||.:||.|:||:.|||:|.
  Fly   390 HELNVDVEKVVDQGAGLAFIVYPEVVTRLPVSPVWAVLFFVMLLTLGLDSQFALMETVTTAILDR 454

Mouse   434 VGNEWILQKKTYVTLGVAVAGFLLGIPLTSQAGIYWLLLMDNYAASFSLVVISCIMCVSIMYIYG 498
            ..|  :.|.|.:|.|.||:.|::.|:..|:.:|:|||.|||.|||::|:::|:...|:.|.:|||
  Fly   455 FPN--LRQYKIWVVLSVAIFGYIGGLGFTTNSGMYWLQLMDKYAANWSVLLIAISECILIAWIYG 517

Mouse   499 HRNYFQDIQMMLG-------FPPPLFFQICWRFVSPAIIFFILIFTVIQYRPITYNHYQYPGWAV 556
            .:.:..|||.|:|       |    |:.|.||:::||.:.|||.|..::|:|..|.||.||.||.
  Fly   518 SQRFLNDIQGMIGKRSWFWNF----FWGIMWRYITPATLLFILFFNWVEYKPAKYGHYVYPMWAD 578

Mouse   557 AIGFLMALSSVICIPLYALFQLCRTDGD-TLLQRLKNATKPSRDWGPA 603
            |:|:::.|..|:.|.|.|..::.|.... :...|:|:..:|:.:||||
  Fly   579 AVGWIVGLLPVLVIFLVAFQEIWRAPMSLSFRDRIKHLLQPTAEWGPA 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc6a9NP_001342104.1 SLC6sbd_GlyT1 30..613 CDD:212067 285/605 (47%)
GlyTNP_611836.2 SNF 57..603 CDD:249680 275/552 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 572 1.000 Domainoid score I226
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3948
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm44351
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11616
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R10344
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.900

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