Sequence 1: | XP_030101431.1 | Gene: | Gfap / 14580 | MGIID: | 95697 | Length: | 470 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001260974.1 | Gene: | LamC / 36615 | FlyBaseID: | FBgn0010397 | Length: | 640 | Species: | Drosophila melanogaster |
Alignment Length: | 522 | Identity: | 151/522 - (28%) |
---|---|---|---|
Similarity: | 231/522 - (44%) | Gaps: | 101/522 - (19%) |
- Green bases have known domain annotations that are detailed below.
Mouse 1 MERRRIT-SARRSYAS-ETVVRGLGPSRQLGTMPRFSLSRMTPPLPARVDFSLAGALNAGFKETR 63
Mouse 64 ASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLR---AKEPTKLADVYQAELRELRLRLD 125
Mouse 126 QLTANSARLEVERDNFAQDLGTLRQKLQDETNLRLEAENNLAAY--------------------- 169
Mouse 170 ---------------------RQEADEATLARVDLERKVESLEEEIQFLRKIYEEEVRELREQLA 213
Mouse 214 QQQVHV-EMD-------VAKPDLTAALREIRTQYEAVATSNMQETEEWYRSKFADLTDAASRNAE 270
Mouse 271 LLRQAKHEANDYRRQLQALTCDLESLRGTNESLERQMREQEERHARESASYQEALARLEEEGQSL 335
Mouse 336 KEEMARHLQEYQDLLNVKLALDIEIATYRKLLEGEENRITIPVQTFSNLQIRGGKSTKEG---EG 397
Mouse 398 QKVTRPLKRLTIQVVPIQAHQIENG-----ALPAAETSLDTKSVSEGHLKRNIVVKTVEMRDGEV 457
Mouse 458 IK 459 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Gfap | XP_030101431.1 | Filament_head | 4..63 | CDD:368088 | 15/60 (25%) |
Filament | 65..373 | CDD:365827 | 115/360 (32%) | ||
LamC | NP_001260974.1 | Filament | 45..401 | CDD:278467 | 115/360 (32%) |
ATP-synt_B | <67..>142 | CDD:304375 | 22/74 (30%) | ||
MreC | <178..>224 | CDD:302802 | 14/45 (31%) | ||
LTD | 473..574 | CDD:279300 | 3/12 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |