DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gdf10 and scw

DIOPT Version :10

Sequence 1:NP_665684.2 Gene:Gdf10 / 14560 MGIID:95684 Length:476 Species:Mus musculus
Sequence 2:NP_524863.3 Gene:scw / 46000 FlyBaseID:FBgn0005590 Length:400 Species:Drosophila melanogaster


Alignment Length:470 Identity:91/470 - (19%)
Similarity:155/470 - (32%) Gaps:161/470 - (34%)


- Green bases have known domain annotations that are detailed below.


Mouse    48 GDRDSQQSPGDAAAALGPGAQDMVAIHMLRLYEKYNRRGAPP----------------------- 89
            |||..:|:.        |...:..:..:|.:|.:.:....|.                       
  Fly    49 GDRPRRQAE--------PNLHNSASKFLLEVYNEISEDQEPKEVLHQRHKRSLDDDILISNEDRQ 105

Mouse    90 --GGGNTVRSFRARL--EMIDQK-PVYF-FNLTSMQDSEMILTAAFHFYSEPPRWPRAREVFCKP 148
              ...|::.:|.:||  |.:|.: .::. ||...:.....::.|....|.:|....|....... 
  Fly   106 EIASCNSILTFSSRLKPEQLDNELDMHITFNTNDVPVDLSLVQAMLRIYKQPSLVDRRANFTVS- 169

Mouse   149 RAKNASCRLLTPGLPARLHLIFRSLSQNTATQGLLRGAMALTPPPRGLWQAKDISSII------K 207
                                ::|.|.........:.|::..|...|| |...:::..:      |
  Fly   170 --------------------VYRKLDNRQDFSYRILGSVNTTSSQRG-WLEFNLTDTLRYWLHNK 213

Mouse   208 AARRDGELLLS---AQLDT---GEKDPGVPRPSSHMPYILVYANDLAISEPNSVAVSLQRYDPFP 266
            ..:|..||.:|   :||.|   |...|...|.|.. |:|:.|.|.      ..:.|.:|:.    
  Fly   214 GLQRRNELRISIGDSQLSTFAAGLVTPQASRTSLE-PFIVGYFNG------PELLVKIQKL---- 267

Mouse   267 AGDFEPGAAPNSSADPRVRRAAQVSKPLQDNELPGLDERPAPALHAQNFHKHEFWSSPFRALKPR 331
                      ....|...|||...|.|            |.|             ..|....:| 
  Fly   268 ----------RFKRDLEKRRAGGGSPP------------PPP-------------PPPVDLYRP- 296

Mouse   332 TGRKDRKKKDQDTFTAASSQVLDFDEKTMQKARRRQWDEPRVCSRRYLKVDFADIGWNEWIISPK 396
                                                   |:.|.|....|||.::..:.|:|:||
  Fly   297 ---------------------------------------PQSCERLNFTVDFKELHMHNWVIAPK 322

Mouse   397 SFDAYYCAGACEFPMPKIVRPSNHATIQSIVRAVGIVPGIPEPCCVPDKMNSLGVL-FLDENRNA 460
            .|:||:|.|.|.||:...:..:|||.:|:::...  .|.:|:|||||..:.::.:| :|:|:...
  Fly   323 KFEAYFCGGGCNFPLGTKMNATNHAIVQTLMHLK--QPHLPKPCCVPTVLGAITILRYLNEDIID 385

Mouse   461 VLKVYPNMSVETCAC 475
            :.| |.....:.|.|
  Fly   386 LTK-YQKAVAKECGC 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gdf10NP_665684.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..63 4/14 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 268..301 6/32 (19%)
TGF_beta_GDF10 365..476 CDD:381664 36/112 (32%)
scwNP_524863.3 TGFb_propeptide 39..254 CDD:480997 41/235 (17%)
TGF_beta_BMP5_like 299..400 CDD:381639 35/104 (34%)

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