DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gata4 and grn

DIOPT Version :10

Sequence 1:NP_001297539.1 Gene:Gata4 / 14463 MGIID:95664 Length:442 Species:Mus musculus
Sequence 2:NP_001262366.1 Gene:grn / 40962 FlyBaseID:FBgn0001138 Length:712 Species:Drosophila melanogaster


Alignment Length:507 Identity:177/507 - (34%)
Similarity:222/507 - (43%) Gaps:132/507 - (26%)


- Green bases have known domain annotations that are detailed below.


Mouse    15 PGAYEAGGPGAFMHSAGAASSPVYVPTPRVPSSVLGLS-YLQGGGSAAAAGT------------- 65
            |..|:| ...||||.....|:.:     ...|..|.:. .:|.|.::.::|:             
  Fly   199 PSEYQA-VMNAFMHQQATGSTSL-----TDASCALDIKPSIQNGSASGSSGSGTTHTSTPKQREG 257

Mouse    66 TSGGSSGAGPSGAGPGTQQGSPGWSQAGAEGAAYTPPPVSPRFSFPGTTGSLAAAAAAAAARE-- 128
            |:..::.:..|.:....||......|...:.::.|....:...|......||:||.||:||..  
  Fly   258 TASTTNSSSNSSSSQQQQQQQQQQQQQQQQSSSNTTASSNTSASSSAAAASLSAAVAASAATSSN 322

Mouse   129 ------AAAYGSGGGAAGAGLAGREQYGRPGFAGSYSSPYPAYMADVGASWAAAAAASAGPFDSP 187
                  |.||.|||...|.|       |..|..|..:|.|.:| ....|...|||.|:|..|.|.
  Fly   323 GLFDGTAQAYSSGGSGGGGG-------GGSGSGGYDTSSYASY-HHAAAHHQAAAVAAANMFQSS 379

Mouse   188 V----------------------------------LH-----------------------SLPGR 195
            .                                  ||                       ||.|.
  Fly   380 SVAAAAVRHSMAAAQAHHHHHHHHSGHHHSGSSSGLHGLGGSVGGTAGMGSMSGNSGGAGSLSGH 444

Mouse   196 ANPGRH--PNLVDMFD------DFSEGRECVNCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINR 252
            :..|.:  .|.:|:..      ..:||||||||||.|||||||||||||||||||||:||||.||
  Fly   445 SGAGSNAGSNCLDVKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNR 509

Mouse   253 PLIKPQRRL------SASRRVGLSCANCQTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMR 311
            |||||:|||      ||::|.|.|||||:|||||||||||.|||||||||||.|||.|.|||.|:
  Fly   510 PLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMK 574

Mouse   312 KEGIQTRKRKPKNLNKSKTPAG----PAG--------ETLPPSSGASSGNSSNATSSSSSSEEMR 364
            |||||||.||..:.:|.|...|    |.|        :.|.||.|...|.|::.......|..:.
  Fly   575 KEGIQTRNRKLSSKSKKKKGLGGGCLPIGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLH 639

Mouse   365 PIKTE------PGLSSHYGHSSSMSQTFST---VSG----HGPSIHPVLSAL 403
            |....      .|.....|.||.:...|||   :||    |....|..||::
  Fly   640 PAHAHMHGSWYTGGMGALGASSGLQGGFSTAGSLSGAVVPHSQPYHLGLSSM 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gata4NP_001297539.1 GATA-N 1..204 CDD:461628 56/269 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 60..107 7/59 (12%)
ZnF_GATA 216..266 CDD:238123 44/55 (80%)
ZnF_GATA 270..321 CDD:238123 42/50 (84%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 314..393 29/103 (28%)
grnNP_001262366.1 ZnF_GATA 473..517 CDD:238123 39/43 (91%)
ZnF_GATA 533..583 CDD:238123 42/49 (86%)

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