DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43968 and Adgrf1

DIOPT Version :9

Sequence 1:NP_001262238.1 Gene:CG43968 / 14462915 FlyBaseID:FBgn0264699 Length:1026 Species:Drosophila melanogaster
Sequence 2:XP_006525183.1 Gene:Adgrf1 / 77596 MGIID:1924846 Length:927 Species:Mus musculus


Alignment Length:335 Identity:60/335 - (17%)
Similarity:114/335 - (34%) Gaps:87/335 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 TINNQTPADFKSQIVSVDCNAFLNAVCIFKSELISNAGCPSGFGALVYQPAVCYGIDWNNTTYEP 265
            ||..|...|..||::..     |.::    |.||.:...|..|....        |||..|   |
Mouse   409 TILLQDAKDASSQLLKT-----LESI----SSLIPSMALPLNFSGKF--------IDWKGT---P 453

  Fly   266 LDLKEYLKKRNWLRRILAKYVLKKNRHEFFKID-FFIHHSTKMEYVIKMSLSEDFQIVSKGLKWI 329
            :...:..:..|:...:.....|....|.|.:.| |...|...:..:..::..:...|..:|..|:
Mouse   454 VTQIQSTRGYNYQMEMRQNASLPIRGHVFIEPDQFQKSHPKTIISMASLTFGDILPITQRGNAWV 518

  Fly   330 --PTLSKQIVKSSSAVEMVLEIDHRSKGVRLVIYNRKYLWKNNNSYVGVKCFALLKYGTLKNVRL 392
              |.:| .::::.|..|:.|.                              |:.:| |.|...|.
Mouse   519 NGPVIS-TLIQNYSISEIFLN------------------------------FSKIK-GNLTQPRC 551

  Fly   393 DLIWENQEQSYSILKVNIVSSYRTEYWCEGHSIFEFQLVSTRLFVDVNRSIAPVFVLRWNVSCIN 457
             :.|:..:..:|.....:|:.......|....:..|.::.:..   |..|:.|  |::| ::.|.
Mouse   552 -VFWDFSQLQWSNAGCQLVNETLDTVLCRCSHLTSFSMLMSPF---VPSSVVP--VVKW-ITYIG 609

  Fly   458 ANFAYNLCDEVTDKNLRKLIESVYGNNNLGNLLIYDVRIMNIEWIKNMCVV----------FWIH 512
            .:.:      :....|..:|||::..         ..:.....:.:|:|:|          .|..
Mouse   610 LSIS------IASLILCLIIESLFWK---------QTKRSQTSYTRNICLVNIAVSLLIADVWFI 659

  Fly   513 ITATLKSTAS 522
            |.||:..:.|
Mouse   660 IAATVDPSVS 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43968NP_001262238.1 None
Adgrf1XP_006525183.1 SEA 172..258 CDD:366610
GPS 549..590 CDD:197639 6/41 (15%)
7tm_GPCRs 603..866 CDD:391938 14/83 (17%)
TM helix 1 603..626 CDD:341315 5/29 (17%)
TM helix 2 641..663 CDD:341315 5/21 (24%)
TM helix 3 675..702 CDD:341315
TM helix 4 716..736 CDD:341315
TM helix 5 757..786 CDD:341315
TM helix 6 803..829 CDD:341315
TM helix 7 834..859 CDD:341315
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.