DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43968 and adgrd2

DIOPT Version :9

Sequence 1:NP_001262238.1 Gene:CG43968 / 14462915 FlyBaseID:FBgn0264699 Length:1026 Species:Drosophila melanogaster
Sequence 2:XP_021334184.1 Gene:adgrd2 / 571770 ZFINID:ZDB-GENE-081104-190 Length:1145 Species:Danio rerio


Alignment Length:399 Identity:78/399 - (19%)
Similarity:124/399 - (31%) Gaps:134/399 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 LKSNHQILMRVCDTNYGHWIPDLIECKIKKNKNLHCPDDLFEIQNVGNIPICLKISTEPKAFNEQ 124
            |::|....:.|.:|    |... ::|..:|.:|:    .||.|...|               :::
Zfish   652 LRNNDFRKVTVLNT----WFSS-VKCLSEKEENI----SLFPIVTDG---------------SQR 692

  Fly   125 F---CYGSNIIA----MDLQ------NFELSKVSQ--FLKKMNISDFWLPIRRNDELMPYEVRLP 174
            |   ..||::|:    .|.|      :|.|....|  .:|.:.:..||          .:::...
Zfish   693 FVGTVLGSSVISSTVLADEQPVSVAIHFTLQHRLQNTSVKFIPVCAFW----------DFDLMSD 747

  Fly   175 GKSWRKEINRSLIHLQNNPNEHCLKHTIN-----------NQTPADFKSQIVSVDCNAFLNAVCI 228
            |..|..: ...:|..|||.......||.|           .....|...||:|:..:|......|
Zfish   748 GGGWSTK-GCVVISTQNNSTSCYCNHTTNFALLLQIYEVQRDAVHDAGLQILSLIGSAVSLCALI 811

  Fly   229 FKSELISNAGCPSG---------FGALVYQPAVCYGIDWNNTTYEPLDLKEYLKKRNWLRRILAK 284
            |...|....|.|..         ..||:....:....||...:.|..          ||...|. 
Zfish   812 FTFILFVAVGVPKSDRTTVHKNLMAALIVAQFLLILSDWAAGSQEAC----------WLVTALL- 865

  Fly   285 YVLKKNRHEFFKIDF---FIHHSTKMEYVIKMSLSED-----FQIVSKGLKWIPTLSKQIVKSSS 341
                   |.||...|   .:........|:.:::|||     :.::..||..:      ||    
Zfish   866 -------HLFFLSSFCWMLVEGLLLWSKVVSVNISEDRRMKMYYVLGWGLPVV------IV---- 913

  Fly   342 AVEMVLEIDHRSKGVRLVIYNRKYLWKNNNSYVGVKCFALLKYGTLKNVRLDLIWENQEQSYSIL 406
            ||.:|..:|....        :::.|.|..|.|                    ||........:|
Zfish   914 AVTLVATLDQYKA--------QQHCWLNLQSSV--------------------IWAFAGPVLFVL 950

  Fly   407 KVNIVSSYR 415
            .||.|..:|
Zfish   951 AVNAVVLFR 959

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43968NP_001262238.1 None
adgrd2XP_021334184.1 LamG 204..402 CDD:328935
GPS 735..779 CDD:307782 11/54 (20%)
7tmB2_GPR144 792..1054 CDD:320383 45/224 (20%)
TM helix 1 794..819 CDD:320383 7/24 (29%)
TM helix 2 828..850 CDD:320383 2/21 (10%)
TM helix 3 859..886 CDD:320383 7/34 (21%)
TM helix 4 898..918 CDD:320383 6/29 (21%)
TM helix 5 935..964 CDD:320383 9/45 (20%)
TM helix 6 988..1015 CDD:320383
TM helix 7 1017..1042 CDD:320383
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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