DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43968 and adgre10

DIOPT Version :9

Sequence 1:NP_001262238.1 Gene:CG43968 / 14462915 FlyBaseID:FBgn0264699 Length:1026 Species:Drosophila melanogaster
Sequence 2:XP_021333746.1 Gene:adgre10 / 569655 ZFINID:ZDB-GENE-090313-152 Length:690 Species:Danio rerio


Alignment Length:446 Identity:96/446 - (21%)
Similarity:168/446 - (37%) Gaps:142/446 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   593 GEIAMTKKLCIQKDGMPYTRLCLGDFVHGAYWKKLTQPVVCESPKNNTKVLHDLQVAKMFKSPPE 657
            |:..:.....||      .:.|.|::  ..|  :|..|::|.:           ..|.:..:..|
Zfish   118 GDCCLNGSFSIQ------VKACPGNY--SVY--ELISPLICSA-----------YCADVHTTLEE 161

  Fly   658 KVLKY-LKDIIANSKNSIVPADIFLIYKIFQSVHEIHSSNSEFQQTTKDLTNWKNAIYEIFDIYN 721
            ....: .||.:.|.        :.||..|...|..:::           :||:.:.:.|..:.:.
Zfish   162 ACTDWTAKDCLVNI--------LELIENITVQVLPLNT-----------VTNYLDMVLEATEKFL 207

  Fly   722 VLIGLDSKVIKMSAEL-NATNMFLKSFEMLFDTL-----SLNNLSFTQIDNGEEHLNDFNSETID 780
            |....||     .||| :..|..|:|.|.|..||     :..|:||| ::|.|.|:  |.     
Zfish   208 VSSSSDS-----PAELASYGNRVLESTEKLISTLVKLTDTSANVSFT-LENVEGHV--FM----- 259

  Fly   781 YDDIGVSVYVSKYILYFSIIPSIANVSGIALFANNNKKNTPTKLKGAFKNEHYRFLQVNHNINDV 845
               :|.:|.::: ||..:...|..::..|.: |.|||......:  ||.:  |..::   |:   
Zfish   260 ---VGPNVTLNE-ILQLNTTNSFMDIDLIGI-AKNNKDTRSAAV--AFMS--YTIME---NL--- 309

  Fly   846 VNEPDLELAAYLPIELIDTLQASTNKTNDVIVVIKVYSNDELFQQSVRNLTLLSRVVSISLPGYS 910
                       |..:..:| |.:|||                        |::|.|:|.:||..|
Zfish   310 -----------LKADFFNT-QKNTNK------------------------TMMSTVISATLPKTS 338

  Fly   911 -SFLPVPVPLIFRKSKNKKVNPPG--SCLVWNYEGWI-DGYSMLSYFENNEGIALCRLRRLAPTG 971
             :.|..||...||..  ::.:|.|  ||:.||...|| ||.|:|:   :|....:|....|:...
Zfish   339 NTALTKPVNFTFRHI--REFDPSGSLSCVYWNISEWIVDGCSVLN---SNSSHTVCSCVHLSTFA 398

  Fly   972 YFLEKKISIENHIINHDLRMSNTKLNGNIIYVILLSCCI-------LMFIGFLFCK 1020
            ..::               .|::....:::.::.|.|.|       |..:.|..|:
Zfish   399 LIMQ---------------TSSSPPPSDLLDLLNLVCVIVGLVFFSLALLSFALCQ 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43968NP_001262238.1 None
adgre10XP_021333746.1 GPS 360..406 CDD:197639 15/63 (24%)
7tm_GPCRs 413..672 CDD:333717 6/27 (22%)
TM helix 1 413..437 CDD:320095 5/23 (22%)
TM helix 2 446..467 CDD:320095
TM helix 3 481..503 CDD:320095
TM helix 4 527..543 CDD:320095
TM helix 5 561..584 CDD:320095
TM helix 6 608..631 CDD:320095
TM helix 7 635..660 CDD:320095
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.