DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43968 and adgrv1

DIOPT Version :9

Sequence 1:NP_001262238.1 Gene:CG43968 / 14462915 FlyBaseID:FBgn0264699 Length:1026 Species:Drosophila melanogaster
Sequence 2:XP_009300028.1 Gene:adgrv1 / 415105 ZFINID:ZDB-GENE-040624-6 Length:6208 Species:Danio rerio


Alignment Length:975 Identity:169/975 - (17%)
Similarity:332/975 - (34%) Gaps:337/975 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 DDLFEIQN--VGNIPICLKISTEPKAFNEQFCYGSNIIAMDLQNFELSKVSQFLKKMNISDFWLP 159
            ||:.|:|.  :.||...:.|:|.|.|...:..|       .|::.| ..|::.:           
Zfish  2897 DDIPELQEFFLVNITSAVLITTLPTAPKLKIYY-------TLKDTE-GLVAEII----------- 2942

  Fly   160 IRRNDELMPYEVRLPGKSWRKEINRSLIHLQNNPNEHCLKHTINNQTPADFKSQIVSVDCNAFLN 224
            |..||.:                 |.:|..||  .::.:..||...|...::      |...:.|
Zfish  2943 INANDGI-----------------RGIIGWQN--IDYVVNETIGVLTLVAYR------DAGTYGN 2982

  Fly   225 AVCIFKSELISNAGCPSGFGALVYQPAVCYGIDWNNTTYEPLDLKEYLKKRNWLRRILAKYVLKK 289
            ....|.::.:.                ...|:|:|.|   |..:                |.:..
Zfish  2983 VSLFFYAQNLE----------------AQLGLDFNAT---PSMI----------------YFVDG 3012

  Fly   290 NRHEFFKIDFFIHHSTKMEYVIKMSLSEDFQIVSKGLKWIPTLSKQIVKSSSAVEMVLEIDHRSK 354
            .||:|.::..       ::..:... .|.||::...    |:...|:.::::|..|:|..|   .
Zfish  3013 ERHKFIEVQI-------LDDAVPEG-DETFQLILAN----PSAGLQLGENTTATVMILAND---D 3062

  Fly   355 GVRLVIYNRK--YLWKNNNSYVGVKCFALLKY-------GTLKNVRL--------------DLIW 396
            |..::.:|..  :|.:...|..|:.......|       ||...|.:              ||  
Zfish  3063 GHGIISFNNSEHFLLREPTSVSGLGTSVATLYIIRDPPQGTFGTVTVQFTITDVNGSLNTDDL-- 3125

  Fly   397 ENQEQSYSILKVNIVSSYRT-EYWC------EGHSIFEFQL----------VSTRLFVDVNRSIA 444
             .....:.:|:..:  .|:| |.|.      |.:..|...|          ||.:.|:.|..:.|
Zfish  3126 -TPSSGFVVLEDGV--RYKTLEIWAVLDAEPEMNETFTVTLSNPTGGARLGVSLQTFITVLENQA 3187

  Fly   445 PVFVLRWNVSCINANFAYNLCDEVT-DKNLRKLIESVYGNNNLGNLLIYDVRIMNIEWIKNMCVV 508
            |:.:.|.:.| ||...     |.:| ::::..:..:|..:|.|.:       .:::||.......
Zfish  3188 PLGLFRISPS-INRTL-----DTMTVEEHMGTVFLTVSRSNGLES-------AVSVEWETRSGTA 3239

  Fly   509 FWIH----ITATLKSTASTYHKEIAFVDNTPRIPKDFVAFMKVKITLSNFFLNFIK----NSTYL 565
            |.:.    :.|..:|...      :|......:|.:..|.:          |..|:    |.|.|
Zfish  3240 FGMRGEQPVLAVYQSIRD------SFASVWCSVPSEDAALV----------LRLIRGLTQNQTVL 3288

  Fly   566 LRSTDYCFSELSFSNDGMHLWWTTTRIGEIAMTKKLCIQKDGMPYTRLCLGDFVHGAYWKKLTQP 630
            .:                   |.    |.....:.:.||.     .:.|:|..|:|:.:      
Zfish  3289 YK-------------------WQ----GVFVPVEFVSIQN-----PKSCVGFTVNGSSY------ 3319

  Fly   631 VVCESPKNNT----------KVLHDLQVA--KMFKSPPEKVLKYLKD----IIANSKNSIVPADI 679
             |..|..:||          :|..||.:.  :.|......|..:..|    :||:|:..:.....
Zfish  3320 -VAVSHADNTVSLTTNISLFRVQADLNLTLEQTFTVSGFSVKHFSTDLKQYLIASSEIFVWNRGS 3383

  Fly   680 FLIYKIFQSVHEI--------HSSNSEFQQTTKDLTNWKNAIYEIFD-----------------I 719
            |.:::..: :.:|        .|||.:.....::.|:....||:..|                 :
Zfish  3384 FFLHQSLE-LQDIIAAVPFRRGSSNVQHLAVCRNRTSAACFIYQWTDGRFQSPQPLALNTQVKQV 3447

  Fly   720 YNVLIGLDSKVIKMSAELN-ATNMFL-KSFEMLF-DTLSLNNLSFTQIDNGEEHLNDFNSETIDY 781
            .:..:|.|:.:..::..|| |..:|| .|.:.:| .|.|:       :..|...::.|.:.:   
Zfish  3448 ESHQMGGDTFLFIVTEGLNPACEVFLWGSQQTVFQQTQSI-------LVPGLFSVHPFTTPS--- 3502

  Fly   782 DDIGVSVYVSKYILYFSIIPSIANVSGIALFANNNKKNTPTKLKGAFKNEHYRFLQVNHNINDVV 846
               |:|     ::|       :|.|:|.||:              ::::|..:|.       :::
Zfish  3503 ---GIS-----HLL-------LAGVNGSALY--------------SWRSELRQFA-------EML 3531

  Fly   847 NEPDLELAAYLPIELIDTLQA---STNKTNDVIVVIKVYSNDE---------LFQQSVRNLTLLS 899
            ..|..:...|||:..|::.::   ::.|::.::..:...||..         .||..|:.|.:..
Zfish  3532 KSPSAQEFLYLPVPSINSTKSLILASGKSSSLVYELTSVSNQSDFIPSSGELFFQPGVQELEIAV 3596

  Fly   900 RVVSISLPGYSSFLPVPVPLIFRKSKNKKVNPPGSCLVWNYEGWI--------DGYSMLSYFENN 956
            .|:...:|.....        ||.|..   ||.|...: .:.|.:        |.|.::.:.:|:
Zfish  3597 NVIDDDVPEEEEH--------FRVSLK---NPKGGAEI-GFRGQVTFFIPANDDTYGIIGFSQNS 3649

  Fly   957  956
            Zfish  3650  3649

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43968NP_001262238.1 None
adgrv1XP_009300028.1 Calx-beta 138..230 CDD:295344
Calx-beta 256..355 CDD:295344
Calx-beta 766..853 CDD:295344
Calx-beta 880..971 CDD:295344
Calx-beta 996..1082 CDD:295344
Laminin_G_3 1343..1484 CDD:290121
Calx-beta 1576..1654 CDD:295344
Calx-beta 1712..1794 CDD:295344
Calx-beta 1849..1939 CDD:295344
Calx-beta 1975..2065 CDD:295344
Calx-beta 2105..2193 CDD:295344
Calx-beta 2220..2310 CDD:295344
Calx-beta 2590..2656 CDD:295344
Calx-beta 2951..3039 CDD:295344 21/138 (15%)
Calx-beta <3574..3614 CDD:295344 8/47 (17%)
Calx-beta 3641..3729 CDD:295344 1/9 (11%)
Calx-beta <3788..3864 CDD:295344
Calx-beta 4021..4112 CDD:295344
Calx-beta 4257..4345 CDD:295344
Calx-beta 4390..4480 CDD:295344
Calx-beta 5003..5085 CDD:295344
7tm_4 <5871..>5926 CDD:304433
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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