DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43968 and adgrl2b.1

DIOPT Version :9

Sequence 1:NP_001262238.1 Gene:CG43968 / 14462915 FlyBaseID:FBgn0264699 Length:1026 Species:Drosophila melanogaster
Sequence 2:NP_001353776.1 Gene:adgrl2b.1 / 110437953 ZFINID:ZDB-GENE-130116-4 Length:1454 Species:Danio rerio


Alignment Length:470 Identity:103/470 - (21%)
Similarity:167/470 - (35%) Gaps:117/470 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   587 WTTTRIGEIAMTKKLCIQKDGMPYTR-----LCLGDFVHGAYWKKLTQPVVCESPK----NNTKV 642
            |..|..|       |.:::.....||     |||    .|..|          :||    :|...
Zfish   480 WPKTHRG-------LTVERPCPRGTRGIALFLCL----TGGVW----------NPKGPDLSNCTS 523

  Fly   643 LHDLQVAKMFKSPPEKVLKYLKDIIANSKNSIVPADIFLIYKIFQSVHEIHSSN-SEFQQTTKDL 706
            ....|||:..:| .|.......::..:::.|:...|:....::.:.:.:|..:. .|.:...||.
Zfish   524 HWVAQVAQKIRS-GENAASLANELAHHTQGSVFAGDVSSSVRLMEQLVDILDAQLQELKPDQKDS 587

  Fly   707 --TNWKNAIYEIFDIYNVLIGLDSKVIKMSAELNATNMFLKSFEMLFDTLSLNNLSFTQIDNGEE 769
              .::..||.:..|  |:   |..:.:|...::|:|.. ..:..||.|||...  :|...||   
Zfish   588 PGRSFNKAIVDTVD--NL---LRPEALKSWEDMNSTEQ-THAATMLLDTLEEG--AFVLADN--- 641

  Fly   770 HLNDFNSETIDYDDIGVSVYV---SKYILYFSIIPSIANVSGIALFANN---NKKNTPTKLKGAF 828
             |.:.....:..::|.:.|||   ...|..|....:....:.|.|.||.   |.||...||.   
Zfish   642 -LIEPAVVRMPAENIMLDVYVLSTDGQIQDFRFPQTSKRGATIQLSANMVKLNSKNGVAKLV--- 702

  Fly   829 KNEHYRFLQVNHNINDVVNEPDLELAAYLPIELIDTLQASTNKTNDVIVVIKVYSNDELFQQSVR 893
                  |:...|            |..:|..|         |.|      :::..:..|     |
Zfish   703 ------FVLYKH------------LGHFLSTE---------NAT------VRLMGDGGL-----R 729

  Fly   894 N--LTLLSRVVSISLPGYSSFLPVPVPLIF---RKSKNKKVNPPGSCLVWNY-EGWIDGY----- 947
            |  ||:.|.::|.|:...||.:.|..|:||   ........||  :|..||| |..:.||     
Zfish   730 NHTLTVNSHILSASINKESSRVFVSEPVIFTLEHLDTENYFNP--NCSFWNYSERSMSGYWSTQG 792

  Fly   948 -SMLSYFENNEGIALCRLRRLAPTGYFLEKKISIENHIINHDLRMSNTKLNGNIIYVILLSCCIL 1011
             .:||   .|:....|....|......:..:.|.......|:|.::.....|..:.::.|:..|.
Zfish   793 CKLLS---TNKTHTTCSCSHLTNFAILMVHRDSHAGEGSVHELLLTVITRLGIAVSLVCLAISIF 854

  Fly  1012 MFIGFLFCKCIFRRL 1026
            .|       |.||.|
Zfish   855 TF-------CFFRGL 862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43968NP_001262238.1 None
adgrl2b.1NP_001353776.1 Gal_Lectin 50..130 CDD:307994
OLF 139..395 CDD:321983
HormR 468..528 CDD:214468 14/68 (21%)
GAIN 538..746 CDD:318649 53/260 (20%)
GPS 770..822 CDD:197639 14/56 (25%)
7tm_GPCRs 831..1088 CDD:333717 9/39 (23%)
TM helix 1 834..858 CDD:320672 4/30 (13%)
TM helix 2 867..888 CDD:320672
TM helix 3 898..920 CDD:320672
TM helix 4 939..955 CDD:320672
TM helix 5 974..997 CDD:320672
TM helix 6 1021..1046 CDD:320672
TM helix 7 1050..1075 CDD:320672
Latrophilin 1087..1454 CDD:308136
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.