DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43783 and CPEB4

DIOPT Version :9

Sequence 1:NP_001261606.1 Gene:CG43783 / 14462845 FlyBaseID:FBgn0264305 Length:1248 Species:Drosophila melanogaster
Sequence 2:NP_085130.2 Gene:CPEB4 / 80315 HGNCID:21747 Length:729 Species:Homo sapiens


Alignment Length:414 Identity:73/414 - (17%)
Similarity:131/414 - (31%) Gaps:121/414 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 NSATSSASGSNSNLSGSTSASASAATSPTSSGTAVGGILSGAPKSPPGLGSSTPISVRFNANEES 74
            |:..|.|:..|:|.:.:.|::.||...|..:...:...:.|:.|:              .:.::.
Human    36 NATPSPAAFINNNTAANGSSAGSAWLFPAPATHNIQDEILGSEKA--------------KSQQQE 86

  Fly    75 LDDILQSFHHSKHSPSGGASGGGDASPTSNLLGMKNNGLGLVVGNCDSLSSSPSQPQMHAGSASL 139
            ..|.|:.   .:.|||.|...|                   ::...:...|..:|    ..::|.
Human    87 QQDPLEK---QQLSPSPGQEAG-------------------ILPETEKAKSEENQ----GDNSSE 125

  Fly   140 FGNDEVSLRNNFMQAGGFFNRKRSGSIEGVSPTSSGPSIISTLSTASAAGGGGSSV--------- 195
            .||.:..:|.......||..::.:|......|.:|..|.::..|..|||....||.         
Human   126 NGNGKEKIRIESPVLTGFDYQEATGLGTSTQPLTSSASSLTGFSNWSAAIAPSSSTIINEDASFF 190

  Fly   196 --GGAVAAGDSNSS--------------GGTWRLIKGKVTQ----------TIEEIKSSKLPPTA 234
              ||..||..:|.:              ||::....|.::|          ...:.:..:..|.:
Human   191 HQGGVPAASANNGALLFQNFPHHVSPGFGGSFSPQIGPLSQHHPHHPHFQHHHSQHQQQRRSPAS 255

  Fly   235 AIPIIVADPPSTGWSNDPDSDTECLTVNTSISEELPLDLEHKQNSDSDVEAELLQHDSISLGSGD 299
            ..|     ||              .|...:...:||    |..|:.:...:....:.|.|     
Human   256 PHP-----PP--------------FTHRNAAFNQLP----HLANNLNKPPSPWSSYQSPS----- 292

  Fly   300 VPTVAAT---------------GHSERSRLRRGLAHIRSKVKAKQQAAP--AMNKKDVSPSGSTV 347
             ||.:::               |...|..|..|:..:.|....|:..|.  ...:|...||.:..
Human   293 -PTPSSSWSPGGGGYGGWGGSQGRDHRRGLNGGITPLNSISPLKKNFASNHIQLQKYARPSSAFA 356

  Fly   348 PATSVRTGFLRRRNVVEAGSEPST 371
            |.:.:.....|..|:......|.|
Human   357 PKSWMEDSLNRADNIFPFPDRPRT 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43783NP_001261606.1 None
CPEB4NP_085130.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..49 4/12 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 78..133 13/94 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 218..328 21/138 (15%)
RRM1_CPEB2_like 472..563 CDD:410123
RNA-binding. /evidence=ECO:0007744|PDB:5DIF 541..543
RRM2_CPEB2_like 580..660 CDD:410125
CEBP_ZZ 655..716 CDD:406704
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0129
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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