DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43783 and Cpeb4

DIOPT Version :9

Sequence 1:NP_001261606.1 Gene:CG43783 / 14462845 FlyBaseID:FBgn0264305 Length:1248 Species:Drosophila melanogaster
Sequence 2:NP_080528.2 Gene:Cpeb4 / 67579 MGIID:1914829 Length:729 Species:Mus musculus


Alignment Length:402 Identity:82/402 - (20%)
Similarity:121/402 - (30%) Gaps:139/402 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KANSATSSASGSNSN-----------LSG---STSASASAATSP-TSSGTAVGGILSGAPKSPPG 57
            ||......:|..|||           |:|   ..:.....:|.| |||.:::.|..:.:....| 
Mouse   114 KAEENPGDSSSENSNGKEKLRIESPVLTGFDYQEATGLGTSTQPLTSSASSLTGFSNWSAAIAP- 177

  Fly    58 LGSSTPISVRFNANEESLDDILQSFHHSKHSPSGGASGGGDASPTSNLLGMKNNGLGLVVGNCDS 122
             .|||.|      ||::      ||.|....|  |||....|....|.....:.|.|      .|
Mouse   178 -SSSTII------NEDA------SFFHQGGVP--GASANNGALLFQNFPHHVSPGFG------GS 221

  Fly   123 LS------------------------------SSPSQPQMHAGSASLFGNDEVSLRNNFMQAGGF 157
            .|                              :||..|.....||:.  |....|.||..:.   
Mouse   222 FSPQIGPLSQHHPHHPHFQHHHSQHQQQRRSPASPHPPPFTHRSAAF--NQLPHLANNLNKP--- 281

  Fly   158 FNRKRSGSIEGVSPTSSGPSIISTLSTASAAGGGGSSVGGAVAAGDSNS--SGGTWRL-----IK 215
                       .||.||..|...|.|::.:.||||....||....|...  :||...|     :|
Mouse   282 -----------PSPWSSYQSPSPTPSSSWSPGGGGYGGWGASQGRDHRRGLNGGITPLNSISPLK 335

  Fly   216 GKVTQTIEEIKSSKLPPTAAIPIIVADPPSTGWSNDPDSDTECL--------TVNTSISEELPLD 272
            ........:::....|.:|..|        ..|..|..:..:.:        |.:....|...:|
Mouse   336 KNFASNHIQLQKYARPSSAFAP--------KSWMEDSLNRADNIFPFPERPRTFDMHSLESSLID 392

  Fly   273 LEHKQN-------------SDSDV------------EAEL--LQHDSISLGSGDVPTVAATG--- 307
            :...:|             |||.:            ::.|  ::...:..|.||.|..:..|   
Mouse   393 IMRAENDSIKGRLNYSYPGSDSSLLINARTYGRRRGQSSLFPMEDGFLDDGRGDQPLHSGLGSPH 457

  Fly   308 ---HSERSRLRR 316
               |....|:.|
Mouse   458 CFTHQNGERVER 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43783NP_001261606.1 None
Cpeb4NP_080528.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..50
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 78..133 6/18 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 218..324 26/127 (20%)
RRM1_CPEB2_like 472..563 CDD:241168
RNA-binding. /evidence=ECO:0000250|UniProtKB:Q17RY0 541..543
RRM2_CPEB2_like 580..660 CDD:241170
CEBP_ZZ 655..716 CDD:374504
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0129
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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