DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43783 and cpeb4a

DIOPT Version :9

Sequence 1:NP_001261606.1 Gene:CG43783 / 14462845 FlyBaseID:FBgn0264305 Length:1248 Species:Drosophila melanogaster
Sequence 2:XP_005173170.2 Gene:cpeb4a / 393956 ZFINID:ZDB-GENE-040426-1557 Length:711 Species:Danio rerio


Alignment Length:344 Identity:73/344 - (21%)
Similarity:112/344 - (32%) Gaps:122/344 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SASGSNSNLSGSTSASASAATSPTSSGTAVGGILSGAP--KSPPGLGSSTPISVRFNANEESLDD 77
            |:|.|:|:|:|.:|.|.:...:|::....||.....|.  .:||.|                   
Zfish   160 SSSSSSSSLTGFSSWSTAMPPNPSTLIEEVGFFNQAATTNNAPPPL------------------- 205

  Fly    78 ILQSFHHSKHSPSG---------GASGGGDASPTSNLLGMKNNGLGLVVGNCDSLSSSPSQPQMH 133
            :.|||.|  |:.:|         |.......||..:.....|..        ...|:||..|...
Zfish   206 LFQSFSH--HTSTGFGGNFSHQIGPLSQHHPSPHPHFQHPHNQH--------RRSSASPHPPPFS 260

  Fly   134 AGSASLFGNDEVSLRNNFMQAGGFFNRKRSGSIEGVSPTSSGPSIISTLSTASAAGGGGSSVGGA 198
            ..||:.  |....|.||..:.              .||..|..|..||.|:.|.:.|||      
Zfish   261 HRSAAF--NQLPHLGNNLSKP--------------PSPWGSYQSPSSTPSSTSWSPGGG------ 303

  Fly   199 VAAGDSNSSGGTWRLIKGKVT--QTIEEIKSSKLPPTAAIPIIVADPPSTGWSNDPDSDTECLTV 261
             ..|..:|.|..:|  :|.|.  .:|..:|.|                      .|::.|:    
Zfish   304 -YGGWGSSQGREYR--RGGVNPLNSISPLKKS----------------------FPNNQTQ---- 339

  Fly   262 NTSISEELPLDLEHKQNSDSDVEAELLQHDSISLGSGDVPTVAATGHSERSR---------LRRG 317
                :::.|       .::|....:....|:|:......|      ..||||         |...
Zfish   340 ----TQKYP-------RNNSGFNTKPWMEDTINRNESIFP------FQERSRSFDGFSMHSLENS 387

  Fly   318 LAHIRSKVKAKQQAAPAMN 336
            |..|   ::|:|.:..|.|
Zfish   388 LIDI---MRAEQDSLKARN 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43783NP_001261606.1 None
cpeb4aXP_005173170.2 RRM 333..616 CDD:223796 18/95 (19%)
RRM1_CPEB2_like 454..545 CDD:241168
RRM2_CPEB2_like 562..642 CDD:241170
CEBP_ZZ 637..698 CDD:292976
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0129
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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