DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43783 and Cpeb3

DIOPT Version :9

Sequence 1:NP_001261606.1 Gene:CG43783 / 14462845 FlyBaseID:FBgn0264305 Length:1248 Species:Drosophila melanogaster
Sequence 2:XP_017445833.1 Gene:Cpeb3 / 309510 RGDID:1564670 Length:779 Species:Rattus norvegicus


Alignment Length:474 Identity:94/474 - (19%)
Similarity:164/474 - (34%) Gaps:120/474 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ANSATSSASGSNSNLSGSTSASASAATSPTSSGTAVGGILSGA-PKSPPGLGSS----------- 61
            |.:|.::|:.|:::.|.:|..|.:||.|..|:  ..||:.:|. |:...|:|..           
  Rat   290 AAAAAAAAAASSASSSWNTHQSVNAAWSAPSN--PWGGLQAGRDPRRAVGVGVGVGVGVPSPLNP 352

  Fly    62 -TPISVRFNANEESLDDILQSFHHSKHSPSGGAS----------GGGDASP---------TSNLL 106
             :|:...|::|      ::......:.:|....|          .|.:..|         |.||.
  Rat   353 ISPLKKPFSSN------VIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPYDTFNLH 411

  Fly   107 GMKNNGLGLVVGNCDSLSSS---PSQPQMHAGSASLFGNDEVSLRNNFMQAGGFFNRKRSGSIEG 168
            .::|:.:.::..:.:.|...   ||.|.|...        ::..||:|  ||..          |
  Rat   412 SLENSLMDMIRTDHEPLKGKHYPPSGPPMSFA--------DIMWRNHF--AGRM----------G 456

  Fly   169 VSPTSSGPSIISTLSTASAAGGGGSSVGGAVAAGDSNSSGGTWRLIKGKVTQTIEEIKSSKLPPT 233
            ::....|...|..|:|.|.....|.|..........:.|.|...|..|..:.|  ..::.:....
  Rat   457 INFHHPGTDNIMALNTRSYGRRRGRSSLFPFEDAFLDDSHGDQALSSGLSSPT--RCQNGERVER 519

  Fly   234 AAIPIIVADPPSTGWSNDPDSDTECLTVNTSISEELPLDLEHKQNSDSDVEAE-----LLQHDSI 293
            .:..:.|...|       ||.|.:.:|.:......|.:|..||..|.|....:     |.|.:| 
  Rat   520 YSRKVFVGGLP-------PDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQEES- 576

  Fly   294 SLGSGDVPTVAATGHSERSRLRRGLAHIRSKVKAKQ--------------QAAPAMNKKDVSPSG 344
                 .|..:......|..:|...::....|.|..|              .:.|...:|.:...|
  Rat   577 -----SVQALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGG 636

  Fly   345 STVPATSVRTGFLRRR---NVVEAG--SEPS------------TSQQAEIAIASGKVKKRGILLA 392
            ...|..:|....:..|   .|..||  ::|.            ::||:.||..|.    |.:.|.
  Rat   637 VPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISA----RFVQLQ 697

  Fly   393 RKDVE--IESGVEVLEDMI 409
            ..|::  :|....||:|.:
  Rat   698 HNDIDKRVEVKPYVLDDQM 716



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0129
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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