DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43783 and mmm1

DIOPT Version :9

Sequence 1:NP_001261606.1 Gene:CG43783 / 14462845 FlyBaseID:FBgn0264305 Length:1248 Species:Drosophila melanogaster
Sequence 2:NP_595534.3 Gene:mmm1 / 2540379 PomBaseID:SPBC27B12.01c Length:313 Species:Schizosaccharomyces pombe


Alignment Length:301 Identity:57/301 - (18%)
Similarity:96/301 - (31%) Gaps:110/301 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   941 SIVWANVLLGRCLYSWLHDAMLHE----KLKEVLQKKLNSIKLPSFMEEVIITNIYLGES-PLLC 1000
            |:.|.|||:.:.|..:.:||..::    ||:.||.|....   .|.::.:.:.::.||:. |:..
pombe    93 SLDWFNVLIAQALIQFRYDACSNDVALRKLETVLNKGAQD---KSMVDHIYVRDLSLGDGFPVFS 154

  Fly  1001 H-RVSQPMLDERGVWIDADVTYEGLAHITVTTKLNLLRIRSKTKSPMATDNVPTTSMLPEQSQDL 1064
            | ||.....:...:..:..|:.....:.||.||| ||....           |..:.|| .|..:
pombe   155 HCRVLPHQHNSSQLRAEMLVSLTDNINCTVDTKL-LLNFPK-----------PAFATLP-LSITV 206

  Fly  1065 RSLSEVNSENVIYDSDAESSGGSSTESESPPPGNAPENAAGTEFFQNSPGNARRIFKIVDRIAAS 1129
            | :.:...:.:||.|                    |.|.||...:.|.                 
pombe   207 R-ICKFVGKIMIYFS--------------------PSNGAGQPAYMNL----------------- 233

  Fly  1130 NLFQYATELPYVQRAMENMNANITLRVDLKGLV-ARGTLNVPPPPSDRVWVSFRGPPRLWISTKP 1193
                             :.:.|..:.:.:..|| ||..|...|.                     
pombe   234 -----------------SFDPNFVISLQVSSLVGARSKLQDIPK--------------------- 260

  Fly  1194 QVGDKSVDWSIVTNVIESKLCEAVNKFLVYPNMVDFSIPFL 1234
                       :|.:|||::.:......|.|.....:||.|
pombe   261 -----------ITQLIESRIRQWFTNRCVSPQFQQIAIPNL 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43783NP_001261606.1 None
mmm1NP_595534.3 MMM1 8..294 CDD:287291 57/301 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13466
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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