DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43783 and Cpeb3

DIOPT Version :9

Sequence 1:NP_001261606.1 Gene:CG43783 / 14462845 FlyBaseID:FBgn0264305 Length:1248 Species:Drosophila melanogaster
Sequence 2:NP_001277755.1 Gene:Cpeb3 / 208922 MGIID:2443075 Length:716 Species:Mus musculus


Alignment Length:480 Identity:95/480 - (19%)
Similarity:166/480 - (34%) Gaps:124/480 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PKANS----ATSSASGSNSNLSGSTSASASAATSPTSSGTAVGGILSGA-PKSPPGLGSS----- 61
            |.::|    |.::|:.|:::.|.:|..|.:||.|..|:  ..||:.:|. |:...|:|..     
Mouse   221 PSSSSAVAAAAAAAAASSASSSWNTHQSVNAAWSAPSN--PWGGLQAGRDPRRAVGVGVGVGVGV 283

  Fly    62 -------TPISVRFNANEESLDDILQSFHHSKHSPSGGAS----------GGGDASP-------- 101
                   :|:...|::|      ::......:.:|....|          .|.:..|        
Mouse   284 PSPLNPISPLKKPFSSN------VIAPPKFPRAAPLTSKSWMEDNAFRTDNGNNLLPFQDRSRPY 342

  Fly   102 -TSNLLGMKNNGLGLVVGNCDSLSSS---PSQPQMHAGSASLFGNDEVSLRNNFMQAGGFFNRKR 162
             |.||..::|:.:.::..:.:.|...   ||.|.|...        ::..||:|  ||..     
Mouse   343 DTFNLHSLENSLMDMIRTDHEPLKGKHYPPSGPPMSFA--------DIMWRNHF--AGRM----- 392

  Fly   163 SGSIEGVSPTSSGPSIISTLSTASAAGGGGSSVGGAVAAGDSNSSGGTWRLIKGKVTQTIEEIKS 227
                 |::....|...|..|:|.|.....|.|..........:.|.|...|..|..:.|  ..::
Mouse   393 -----GINFHHPGTDNIMALNTRSYGRRRGRSSLFPFEDAFLDDSHGDQALSSGLSSPT--RCQN 450

  Fly   228 SKLPPTAAIPIIVADPPSTGWSNDPDSDTECLTVNTSISEELPLDLEHKQNSDSDVEAE-----L 287
            .:.....:..:.|...|       ||.|.:.:|.:......|.:|..||..|.|....:     |
Mouse   451 GERVERYSRKVFVGGLP-------PDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLL 508

  Fly   288 LQHDSISLGSGDVPTVAATGHSERSRLRRGLAHIRSKVKAKQ--------------QAAPAMNKK 338
            .|.:|      .|..:......|..:|...::....|.|..|              .:.|...:|
Mouse   509 FQEES------SVQALIDACLEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRK 567

  Fly   339 DVSPSGSTVPATSVRTGFLRRR---NVVEAG--SEPS------------TSQQAEIAIASGKVKK 386
            .:...|...|..:|....:..|   .|..||  ::|.            ::||:.||..|.    
Mouse   568 TIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISA---- 628

  Fly   387 RGILLARKDVE--IESGVEVLEDMI 409
            |.:.|...|::  :|....||:|.:
Mouse   629 RFVQLQHNDIDKRVEVKPYVLDDQM 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43783NP_001261606.1 None
Cpeb3NP_001277755.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..118
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 162..209
RRM1_CPEB2_like 459..550 CDD:241168 21/103 (20%)
RRM2_CPEB2_like 567..647 CDD:241170 18/83 (22%)
CEBP_ZZ 642..703 CDD:374504 4/12 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0129
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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