DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43798 and col27a1a

DIOPT Version :10

Sequence 1:NP_001260043.1 Gene:CG43798 / 14462699 FlyBaseID:FBgn0264342 Length:213 Species:Drosophila melanogaster
Sequence 2:NP_001156766.1 Gene:col27a1a / 100004688 ZFINID:ZDB-GENE-100119-1 Length:1783 Species:Danio rerio


Alignment Length:116 Identity:31/116 - (26%)
Similarity:46/116 - (39%) Gaps:4/116 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 NEYHREILRVRSEYKPFHFAYVPEYDHNWGLSPTTTRTTTTTTPTTTTTTTTTTTTTTPTTTTTT 161
            |:....||:.....||    .||:........|...:..:.|||.|..:|....:|:.....|..
Zfish   426 NKKQNAILKPLPAPKP----TVPKRPSPTNKKPLQPKNKSHTTPLTPKSTLAPNSTSKKPLPTLK 486

  Fly   162 TTTPTTPATTTTPTTTTSPKTNPFVDPTSTPGPTGSDEEYVIQNINFFSHD 212
            :|:.||.|....|.|..:||.||....|..|..|.....:.||::...:.|
Zfish   487 STSFTTAAPNKPPKTLETPKVNPDKSKTPVPYSTPRTPRFSIQSVTLPAFD 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43798NP_001260043.1 None
col27a1aNP_001156766.1 LamG 41..220 CDD:473984
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 288..312
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 327..524 28/101 (28%)
PHA03247 <329..525 CDD:223021 28/102 (27%)
Triple-helical region. /evidence=ECO:0000255 553..1547
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 553..744
gly_rich_SclB <654..>875 CDD:468478
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 772..1461
gly_rich_SclB <893..>1162 CDD:468478
gly_rich_SclB <1072..>1325 CDD:468478
gly_rich_SclB <1261..>1493 CDD:468478
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1512..1546
COLFI 1589..1783 CDD:470578
Blue background indicates that the domain is not in the aligned region.

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