DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr22d and Gr68a

DIOPT Version :9

Sequence 1:NP_001259882.1 Gene:Gr22d / 14462661 FlyBaseID:FBgn0045498 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_524027.2 Gene:Gr68a / 39324 FlyBaseID:FBgn0041231 Length:389 Species:Drosophila melanogaster


Alignment Length:395 Identity:88/395 - (22%)
Similarity:136/395 - (34%) Gaps:125/395 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LILFG-------VVISSSLLILMVKQSAEDREHGIMLDVFQRNALLYQISSLMGVVGVVSICTVH 104
            :||.|       |:.:|....|:.....:..|....::     .||..||..|.|:..|...:.|
  Fly    47 IILIGSLTLGEDVLFASKEYRLVASAQGDTEEINRTIE-----TLLCIISYTMVVLSSVQNASRH 106

  Fly   105 LRTLWRSKHLEE--IYNGLMLLEAKYFCSNAVECPAFDGYVIQKGVVIVVGLLAPWMVHFGMPDS 167
            .|||.....::|  :.||   ....|.|.|                                   
  Fly   107 FRTLHDIAKIDEYLLANG---FRETYSCRN----------------------------------- 133

  Fly   168 KLPVLNVLVVSMVKLGTLLLA---LHYHLGV--------VIIYRFVWLINRELLSLVCSLRGNHK 221
                |.:||.|... |.|.:|   :||..|:        ::|| |:.|:...||:|.  ||....
  Fly   134 ----LTILVTSAAG-GVLAVAFYYIHYRSGIGAKRQIILLLIY-FLQLLYSTLLALY--LRTLMM 190

  Fly   222 GSSSRVRFLLKLYNKLVNLYSKLADCYDCQT---------VLMMAIFLAANI--------IVCFY 269
            ..:.|:.||    |:.::.:: |.||...:.         ||....::..||        :..|.
  Fly   191 NLAQRIGFL----NQKLDTFN-LQDCGHMENWRELSNLIEVLCKFRYITENINCVAGVSLLFYFG 250

  Fly   270 MIVYRISLSKMSFFVMLIMFPLAIANNFMD------FW-----LSMKV----CDLLQKTGRQTSM 319
            ...|.::......|..|....|:......|      .|     ::|.|    ||.|......|:.
  Fly   251 FSFYTVTNQSYLAFATLTAGSLSSKTEVADTIGLSCIWVLAETITMIVICSACDGLASEVNGTAQ 315

  Fly   320 IL-------KLFNDIENMDKDLEISISDFALYCSHRRFKFLHCGLFHVNREMGFKMFVASVLYLL 377
            ||       |.|.::  :||.|..||.        :..:|...|.|.::....||:|.|...||:
  Fly   316 ILARIYGKSKQFQNL--IDKFLTKSIK--------QDLQFTAYGFFSIDNSTLFKIFSAVTTYLV 370

  Fly   378 YLVQF 382
            .|:||
  Fly   371 ILIQF 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr22dNP_001259882.1 7tm_7 17..386 CDD:285581 88/395 (22%)
Gr68aNP_524027.2 7tm_7 7..379 CDD:285581 88/395 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.