DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr22d and lite-1

DIOPT Version :9

Sequence 1:NP_001259882.1 Gene:Gr22d / 14462661 FlyBaseID:FBgn0045498 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_509043.3 Gene:lite-1 / 180894 WormBaseID:WBGene00001803 Length:439 Species:Caenorhabditis elegans


Alignment Length:427 Identity:79/427 - (18%)
Similarity:149/427 - (34%) Gaps:122/427 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 RSMWLILFGVV--ISSSLLILMVKQSAEDREHGIMLDVFQRNALLYQISSLMGVVGVVSICTVHL 105
            |:.|.|....:  |...||||.:.||           :...|:||::|.|.:      ..|.:..
 Worm    38 RNKWAICDRTLYPIYYLLLILGLNQS-----------IRPNNSLLFRIYSWL------VFCLLLF 85

  Fly   106 RTLWR-----------SKHLEEIY----------NGLMLLEA------------------KYFCS 131
            .||.:           .::|:|.:          |.|::|..                  |..|.
 Worm    86 TTLRKFNQVGVRPNGTRENLQEFFANPRSMITLCNALIMLSGLLASLQLYTLGAKRLKPLKILCQ 150

  Fly   132 NAVECPAFDG----YVIQKGVVIVVGLLAPWMVHFGMPDSKLPVLNVLVVSMVKLGTLLLALHYH 192
            .::.......    ::|...:.:..||||..|              ....:|.|.|.:|    |.
 Worm   151 FSLNVRTKQAERRQFMINTFLAVFSGLLALTM--------------AATYAMSKWGYIL----YI 197

  Fly   193 LGV----------VIIYRFVWLINRELLSLVCSLRGNHKGSSSRVRFLLK-LYNKLVNL------ 240
            :|.          |::..:...::|..:|.:..|...|   .|.:|..:| |.|::|..      
 Worm   198 VGTPNLDTETIFCVLLDSYALFVSRAAISALAILFYQH---CSVIRRSIKHLINEMVPAEQDECP 259

  Fly   241 --YSKLADCYDCQTVLMMAIFLAANIIVCFYMIV----YRISLSKMSFFVM------------LI 287
              .|.|...:||| :....||....:|..:|..|    |.:.:....|.:.            ::
 Worm   260 LPESSLQKIHDCQ-ISYQRIFNGKAVIEEYYSFVLFYSYGVCIPIFCFLMFVGMSAQSICWSEVV 323

  Fly   288 MFPLAIANNFMDFWLSMKVCDLLQKTG-RQTSMILKLFNDIENMDKDLEI--SISDFALYCSHRR 349
            ...:.|.|..:...|......::.:.| |..:...:::::..:.::||.:  .::.|.......:
 Worm   324 SIVIWIVNAILVLLLFSLPAFMINEDGDRLVASSFRMYHETFHEERDLTVLSQMTFFTFQIHSTK 388

  Fly   350 FKFLHCGLFHVNREMGFKMFVASVLYLLYLVQFDYMN 386
            .....|..|:::|.:...:|.|.:.|.|.|.:||..|
 Worm   389 LTLSACNYFYMDRSILLSLFSAILTYFLILWEFDIKN 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr22dNP_001259882.1 7tm_7 17..386 CDD:285581 78/425 (18%)
lite-1NP_509043.3 7tm_7 75..425 CDD:285581 64/377 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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