DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr22d and lite-1

DIOPT Version :10

Sequence 1:NP_001259882.1 Gene:Gr22d / 14462661 FlyBaseID:FBgn0045498 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_509043.3 Gene:lite-1 / 180894 WormBaseID:WBGene00001803 Length:439 Species:Caenorhabditis elegans


Alignment Length:427 Identity:79/427 - (18%)
Similarity:149/427 - (34%) Gaps:122/427 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 RSMWLILFGVV--ISSSLLILMVKQSAEDREHGIMLDVFQRNALLYQISSLMGVVGVVSICTVHL 105
            |:.|.|....:  |...||||.:.||           :...|:||::|.|.:      ..|.:..
 Worm    38 RNKWAICDRTLYPIYYLLLILGLNQS-----------IRPNNSLLFRIYSWL------VFCLLLF 85

  Fly   106 RTLWR-----------SKHLEEIY----------NGLMLLEA------------------KYFCS 131
            .||.:           .::|:|.:          |.|::|..                  |..|.
 Worm    86 TTLRKFNQVGVRPNGTRENLQEFFANPRSMITLCNALIMLSGLLASLQLYTLGAKRLKPLKILCQ 150

  Fly   132 NAVECPAFDG----YVIQKGVVIVVGLLAPWMVHFGMPDSKLPVLNVLVVSMVKLGTLLLALHYH 192
            .::.......    ::|...:.:..||||..|              ....:|.|.|.:|    |.
 Worm   151 FSLNVRTKQAERRQFMINTFLAVFSGLLALTM--------------AATYAMSKWGYIL----YI 197

  Fly   193 LGV----------VIIYRFVWLINRELLSLVCSLRGNHKGSSSRVRFLLK-LYNKLVNL------ 240
            :|.          |::..:...::|..:|.:..|...|   .|.:|..:| |.|::|..      
 Worm   198 VGTPNLDTETIFCVLLDSYALFVSRAAISALAILFYQH---CSVIRRSIKHLINEMVPAEQDECP 259

  Fly   241 --YSKLADCYDCQTVLMMAIFLAANIIVCFYMIV----YRISLSKMSFFVM------------LI 287
              .|.|...:||| :....||....:|..:|..|    |.:.:....|.:.            ::
 Worm   260 LPESSLQKIHDCQ-ISYQRIFNGKAVIEEYYSFVLFYSYGVCIPIFCFLMFVGMSAQSICWSEVV 323

  Fly   288 MFPLAIANNFMDFWLSMKVCDLLQKTG-RQTSMILKLFNDIENMDKDLEI--SISDFALYCSHRR 349
            ...:.|.|..:...|......::.:.| |..:...:::::..:.::||.:  .::.|.......:
 Worm   324 SIVIWIVNAILVLLLFSLPAFMINEDGDRLVASSFRMYHETFHEERDLTVLSQMTFFTFQIHSTK 388

  Fly   350 FKFLHCGLFHVNREMGFKMFVASVLYLLYLVQFDYMN 386
            .....|..|:::|.:...:|.|.:.|.|.|.:||..|
 Worm   389 LTLSACNYFYMDRSILLSLFSAILTYFLILWEFDIKN 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr22dNP_001259882.1 7tm_7 17..386 CDD:462463 78/425 (18%)
lite-1NP_509043.3 7tm_7 75..425 CDD:462463 64/377 (17%)

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