DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr22d and Gr10a

DIOPT Version :9

Sequence 1:NP_001259882.1 Gene:Gr22d / 14462661 FlyBaseID:FBgn0045498 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_727523.1 Gene:Gr10a / 117501 FlyBaseID:FBgn0045502 Length:408 Species:Drosophila melanogaster


Alignment Length:427 Identity:83/427 - (19%)
Similarity:165/427 - (38%) Gaps:97/427 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RQKFVYVILKSILYSSWLLGIFPFKYEPKKRRLRR--SMWLILFGVVISSSLLILM--------- 62
            |...||    :::|...::...|      :|.|:|  .:.||.:|.:.|..|::::         
  Fly    20 RYGHVY----ALIYGQVVIDYVP------QRALKRGVKVLLIAYGHLFSMLLIVVLPGYFCYHFR 74

  Fly    63 VKQSAEDREHGIMLDV-FQRNALLYQISSLMGVVGVVSICTVHLRTLWRSKHLEEIYNGLMLLEA 126
            ......||...::..| |...|:.|....:..|...|....::.|...:..|||        .|.
  Fly    75 TLTDTLDRRLQLLFYVSFTNTAIKYATVIVTYVANTVHFEAINQRCTMQRTHLE--------FEF 131

  Fly   127 KYFCSNAVECP--AFDGYVIQKGVVI-------VVGLLAPW-MVHFGMPDSKLPVLNVLVVSMVK 181
            |    ||.:.|  .|:.::..|..:|       |.|:.|.: .|..|.            ||.|:
  Fly   132 K----NAPQEPKRPFEFFMYFKFCLINLMMMIQVCGIFAQYGEVGKGS------------VSQVR 180

  Fly   182 LGTLLLALHYHLGVVIIYRFV-------WLINRELLSL-------VCSLRGNHKG---SSSRVRF 229
                   :|:.:...:::.:.       :.||..:|..       :.|||....|   ....:..
  Fly   181 -------VHFAIYAFVLWNYTENMADYCYFINGSVLKYYRQFNLQLGSLRDEMDGLRPGGMLLHH 238

  Fly   230 LLKLYNKLVNLYSKLADCYDCQTV-----------LMMAIFL--AANIIVCFYMIVYRISLSKMS 281
            ..:|.::|..|..:..:.:|.|..           ||::..:  ..|....|:|:. :.||.::|
  Fly   239 CCELSDRLEELRRRCREIHDLQRESFRMHQFQLIGLMLSTLINNLTNFYTLFHMLA-KQSLEEVS 302

  Fly   282 FFVMLIMFPLAIANNFMDFWLSMKVCDLLQKTGRQTSMILKLFNDIENMDKDLEISISDFALYCS 346
            :.|  ::..:.....::|.::...:.:.::......::.::.|.:...||:.|...|...:|...
  Fly   303 YPV--VVGSVYATGFYIDTYIVALINEHIKLELEAVALTMRRFAEPREMDERLTREIEHLSLELL 365

  Fly   347 HRRFKFLHCGLFHVNREMGFKMFVASVLYLLYLVQFD 383
            :.:...| |||.|::|.:.:.:.|.:..|.:.|||||
  Fly   366 NYQPPML-CGLLHLDRRLVYLIAVTAFSYFITLVQFD 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr22dNP_001259882.1 7tm_7 17..386 CDD:285581 80/419 (19%)
Gr10aNP_727523.1 7tm_7 20..402 CDD:285581 83/427 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.