DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr22d and Gr98b

DIOPT Version :9

Sequence 1:NP_001259882.1 Gene:Gr22d / 14462661 FlyBaseID:FBgn0045498 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_733213.1 Gene:Gr98b / 117327 FlyBaseID:FBgn0046887 Length:403 Species:Drosophila melanogaster


Alignment Length:447 Identity:91/447 - (20%)
Similarity:157/447 - (35%) Gaps:139/447 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LRQKFVYVILKSILYSSWLLGIFP----FKYEPKKRRLRRSMWLILFGVVISSSLLILMVKQSAE 68
            |.:.|.|:.:.|:      ..:.|    |.:.| .||||   |.::.|.|..::.::..|     
  Fly     9 LARAFPYLDIFSV------FALTPPPQSFGHTP-HRRLR---WYLMTGYVFYATAILATV----- 58

  Fly    69 DREHGIMLDVF-----QRNALLYQISSLMGVVG-----VVSICTV--HLRTLWRSKHLEEIYNGL 121
                 .::..|     ....|.|.:|....|:|     :.||..:  ||..|...:.|..||..:
  Fly    59 -----FIVSYFNIIAIDEEVLEYNVSDFTRVMGNIQKSLYSIMAIANHLNMLINYRRLGGIYKDI 118

  Fly   122 MLLEAKYFCSNAVECPAFDG----YVIQKGVVIVVGLLAPWMVHF--GMPDSKLPVLNVLVVSMV 180
            ..||..  ...|.:|  |.|    :..:..:.:.||:   ||:..  .||...:..:...|.:::
  Fly   119 ADLEMD--MDEASQC--FGGQRQRFSFRFRMALCVGV---WMILMVGSMPRLTMTAMGPFVSTLL 176

  Fly   181 KLGT-------LLLALHYHLGVVIIYRFVWLINR---------------ELLSLVC--------- 214
            |:.|       .|.:|.|.:.|:|||..|..:.|               ::|..:|         
  Fly   177 KILTEFVMIMQQLKSLEYCVFVLIIYELVLRLRRTLSQLQEEFQDCEQQDMLQALCVALKRNQLL 241

  Fly   215 -----SLRGNHKGSSSRVRFLLKLYNKLVNLY-------SKLADCYD--CQTVLMMAIFLAANII 265
                 .|.|:.....:....||.|||.|..|:       :|.  .||  ||         ....:
  Fly   242 LGRIWRLEGDVGSYFTPTMLLLFLYNGLTILHMVNWAYINKF--LYDSCCQ---------YERFL 295

  Fly   266 VCFYMIVYRISLSKMSFFVMLIMFPLAIANNFMDFWLSMKVCDLLQKTGRQTSMILKLFNDIENM 330
            ||..::|.             ::.|                |.|.|:.....:...::.:.|...
  Fly   296 VCSTLLVN-------------LLLP----------------CLLSQRCINAYNCFPRILHKIRCT 331

  Fly   331 DKD-----LEISISDFALYCSHRRFKFLHCGLFHVNREMGFKMFVASVLYLLYLVQF 382
            ..|     |...:.:::|...|.:.:|...|||.:|.:....:.|....|::.|:||
  Fly   332 SADPNFAMLTRGLREYSLQMEHLKLRFTCGGLFDINLKYFGGLLVTIFGYIIILIQF 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr22dNP_001259882.1 7tm_7 17..386 CDD:285581 88/438 (20%)
Gr98bNP_733213.1 7tm_7 13..391 CDD:285581 90/443 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.