DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43777 and Glipr1

DIOPT Version :10

Sequence 1:NP_001261163.1 Gene:CG43777 / 14462631 FlyBaseID:FBgn0264299 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001011987.1 Gene:Glipr1 / 299783 RGDID:1305978 Length:251 Species:Rattus norvegicus


Alignment Length:268 Identity:61/268 - (22%)
Similarity:95/268 - (35%) Gaps:87/268 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LLLAVVLLLPLTSGYNYCNNKTHKCVLEKKKHFMCHLKDFTVYGNSTKFHASVPNNMRMQKIALD 69
            ||..:|.:....||::|..:...|...|          ||.                   :..::
  Rat     4 LLAVMVWMASSASGFSYTASTLPKITNE----------DFI-------------------EECVE 39

  Fly    70 ILNNLRNKFAGGELRTKGNKTFAKARRMRQLFWDKELAYMGNNHA-STLSLKSSQCRSTL--RFP 131
            :.|:.|            :|.:..|..|..:.||.:||.:....| |.:...:.|..|.:  .|.
  Rat    40 VHNHFR------------SKAYPPAGNMLYMSWDPKLAQIAKAWAQSCVFQHNPQLHSRIHPNFT 92

  Fly   132 HVGEAIALVTPREKLNLKEIYSKAFTPMFAEYQHVSDPDALLHAFDPDRDFQV-RHFTNIISDRV 195
            .:||.|.|    ..|:|..:.: |....|.|.|:        :.|...:..:| .|:|.|:....
  Rat    93 GLGENIWL----GSLSLFSVRA-AILAWFEESQY--------YDFSTGKCKKVCGHYTQIVWADS 144

  Fly   196 SRVGCGVAV---GAN--CNPSIKFCHFLTCYFDFHNMAGSY---VYKAGDPTSSCDDWGVVSSDK 252
            .::||.|.:   |||  ||               :..||:|   .||.|...|:|.     ..||
  Rat   145 YKIGCAVQLCPRGANFICN---------------YGPAGNYPTWPYKQGATCSACP-----KDDK 189

  Fly   253 -YANLCKN 259
             ..|||.|
  Rat   190 CLNNLCTN 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43777NP_001261163.1 CAP_euk 64..223 CDD:349399 37/167 (22%)
Glipr1NP_001011987.1 CAP 32..168 CDD:412178 39/194 (20%)

Return to query results.
Submit another query.