DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43777 and r3hdml

DIOPT Version :10

Sequence 1:NP_001261163.1 Gene:CG43777 / 14462631 FlyBaseID:FBgn0264299 Length:273 Species:Drosophila melanogaster
Sequence 2:XP_017953344.1 Gene:r3hdml / 100492715 XenbaseID:XB-GENE-1011048 Length:253 Species:Xenopus tropicalis


Alignment Length:259 Identity:56/259 - (21%)
Similarity:84/259 - (32%) Gaps:105/259 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 NSTK--FHASVPNNMRMQKIA-------LDILNNLRNKFAGGELRTKGNKTFAKARRMRQLFWDK 104
            |.|:  |.:.:|...|.:.|:       ||..|.:|            :|.|..|..|..:.||:
 Frog    39 NQTEHMFGSGIPRIRRKRYISPRDMSALLDYHNQVR------------SKVFPPAANMEYMVWDE 91

  Fly   105 ELA---------------------YMGNNHASTLSLKSSQCRSTL-------------RFPHVGE 135
            .||                     |:|.|    ||:.|.:.||.:             .|||   
 Frog    92 RLAKSAESWANQCKWDHGPNQLMRYIGQN----LSVHSGRYRSIVDLVKGWYDERQHYSFPH--- 149

  Fly   136 AIALVTPREKLNLKEIYSKAFTPMFAEYQHVSDPDALLHAFDPDRDFQVRHFTNIISDRVSRVGC 200
                  |||                   .:.|.|:....|.       ..|:|.::....:|:||
 Frog   150 ------PRE-------------------CNPSCPNKCTGAV-------CTHYTQMVWASSNRIGC 182

  Fly   201 GVAVGANCN---PSIKFCHFLTCYFDFH-NMAGSYVYKAGDPTSSCDDWGVVSSDKYANLCKNS 260
            .|.:..|.|   .:.:...:|.|.:... |..|...||.|.|.|:|       ...|..:|.|:
 Frog   183 AVNICTNINVWGSTWRQASYLVCNYSIKGNWIGEAPYKLGRPCSAC-------PPSYGGVCSNN 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43777NP_001261163.1 CAP_euk 64..223 CDD:349399 40/202 (20%)
r3hdmlXP_017953344.1 CAP_R3HDML 63..208 CDD:349409 39/195 (20%)

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