DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43776 and AT3G09590

DIOPT Version :10

Sequence 1:NP_001261162.1 Gene:CG43776 / 14462630 FlyBaseID:FBgn0264298 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_187570.1 Gene:AT3G09590 / 820116 AraportID:AT3G09590 Length:186 Species:Arabidopsis thaliana


Alignment Length:197 Identity:41/197 - (20%)
Similarity:66/197 - (33%) Gaps:48/197 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 PSLGGTRYHAIVPDIPKLRTEILRIINNFRNQFASGAFRTSENRTFTQAKRMRQIL-------WD 103
            ||:.||       .||.......|::|..|        |...:|.|.||....::.       ||
plant    23 PSVLGT-------SIPDAVNTAARLVNRAR--------RAKLSREFLQAHNDARVSSGVPTLGWD 72

  Fly   104 SELAYMARSHASTVSFQHTKCRSTVRFPRVGECLAMMVPKYKHTVHEALKKMF--KIMFDEHLHI 166
            .:||..|...|..   :.:.|.........||.:.....|...:..:.:.:.|  :..:|...:.
plant    73 RDLARFADKWAKQ---RKSDCSMIHSGGPYGENIFWHRRKKTWSPEKVVTRWFEERFNYDVKTNT 134

  Fly   167 QDPRGLLQGFHPIRDYVSSHFTIIVSDRVSRVGCGVAVGTNCRQGSSSNFCHFLTCYFDYDNVNG 231
            ..| |.:.|          |:|.:|....:.|||   ....|..|..    :.:.|.:|   ..|
plant   135 CAP-GKMCG----------HYTQMVWRETTAVGC---ARVKCHNGRG----YLVVCEYD---PRG 178

  Fly   232 SY 233
            :|
plant   179 NY 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43776NP_001261162.1 CAP_euk 64..225 CDD:349399 32/169 (19%)
AT3G09590NP_187570.1 CAP_PR-1 50..186 CDD:349400 31/155 (20%)

Return to query results.
Submit another query.