DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43776 and Crispld2

DIOPT Version :9

Sequence 1:NP_001261162.1 Gene:CG43776 / 14462630 FlyBaseID:FBgn0264298 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_001297564.1 Gene:Crispld2 / 78892 MGIID:1926142 Length:495 Species:Mus musculus


Alignment Length:226 Identity:49/226 - (21%)
Similarity:75/226 - (33%) Gaps:76/226 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 RTEILRIINNFRNQFASGAFRTSENRTFTQAKRMRQILWDSELAYMARSHASTVSFQHTKC---R 125
            |.|||.:.|..|.|            .:..|..|..:.||.||...|.:.|....::|...   |
Mouse    56 RQEILMLHNKLRGQ------------VYPPASNMEHMTWDEELERSAAAWAHRCLWEHGPAGLLR 108

  Fly   126 STVRFPRVGECLAMMVPKYKHTVHEALKKMFKIMFDEHLHIQDPRGLLQGFHPIRDY-------- 182
            |      :|:.||:...:|:               ....|:|      ..:..::||        
Mouse   109 S------IGQNLAVHWGRYR---------------SPGFHVQ------SWYDEVKDYTYPYPHEC 146

  Fly   183 -----------VSSHFTIIVSDRVSRVGCGVAVGTNCRQ----GSSSNFCHFLTC-YFDYDNVNG 231
                       :.:|:|.:|....:::||.|   ..||.    |.:.....:|.| |....|..|
Mouse   147 TPRCRERCSGPMCTHYTQMVWATTNKIGCAV---HTCRNMNVWGDTWENAVYLVCNYSPKGNWIG 208

  Fly   232 SYVYKAGKPASSCSDWGTTKSKEFANLCYNN 262
            ...||.|:|.|.|       ...:...|.||
Mouse   209 EAPYKHGRPCSEC-------PSSYGGGCLNN 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43776NP_001261162.1 SCP_euk 64..225 CDD:240180 38/187 (20%)
Crispld2NP_001297564.1 CAP 56..201 CDD:381818 37/186 (20%)
LCCL 284..368 CDD:128866
LCCL 387..486 CDD:367672
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841297
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X35
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.850

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