DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43776 and glipr2

DIOPT Version :9

Sequence 1:NP_001261162.1 Gene:CG43776 / 14462630 FlyBaseID:FBgn0264298 Length:270 Species:Drosophila melanogaster
Sequence 2:XP_021327299.1 Gene:glipr2 / 325699 ZFINID:ZDB-GENE-030131-4424 Length:543 Species:Danio rerio


Alignment Length:217 Identity:40/217 - (18%)
Similarity:71/217 - (32%) Gaps:57/217 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 LGGTRYHAIVPDIPKLRTEILRIINNFRNQFASGAFRTSENRTFTQAKRMRQILWDSELAYMARS 112
            :.||.:.|          |.|::.|.:|.|..:.....::|...:..:....:|....||:..:.
Zfish     1 MAGTSFEA----------EFLQVHNAYRKQHGAPPLTFNKNLCRSAQQWAEHLLSTKTLAHSNKG 55

  Fly   113 HASTVSFQHTKCRSTVRFPRVGECLAMMVPKYKHTVHEALKKMFKIMFDEHLHIQDPRGLLQGFH 177
            :...:.:..:....                  |.|.:||:...:              |.::.::
Zfish    56 YGENLYYAWSSANK------------------KLTGNEAVDSWY--------------GEIKDYN 88

  Fly   178 PIRDYVSS---HFTIIVSDRVSRVGCGVAVGTNCRQGSSSNFCHFLTCYFDYDNV-NGSYVYKAG 238
            ..|...||   |||.:|......:|.|:|        :..|....:..|....|: |..|..|..
Zfish    89 FSRPGFSSKTGHFTQVVWKDTKELGVGLA--------TDGNTIFVVGQYLPAGNIANAGYFEKNV 145

  Fly   239 KPASSCSD---WGTTKSKEFAN 257
            .|..|..|   .|.|...|.|:
Zfish   146 LPTGSKLDQKPTGATHKGEQAH 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43776NP_001261162.1 SCP_euk 64..225 CDD:240180 26/163 (16%)
glipr2XP_021327299.1 SCP_GAPR-1_like 5..135 CDD:240182 27/179 (15%)
SCP_GAPR-1_like 196..326 CDD:240182
SCP_GAPR-1_like 397..528 CDD:240182
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X35
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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