DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43776 and Crispld1

DIOPT Version :10

Sequence 1:NP_001261162.1 Gene:CG43776 / 14462630 FlyBaseID:FBgn0264298 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_001128435.1 Gene:Crispld1 / 316482 RGDID:1564813 Length:500 Species:Rattus norvegicus


Alignment Length:224 Identity:60/224 - (26%)
Similarity:83/224 - (37%) Gaps:69/224 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 ILRIINNFRNQFASGAFRTSENRTFTQAKRMRQILWDSELAYMARSHASTVSFQHTKCRSTVRFP 131
            ||.:.|..|:|            .:..|..|..:.||.||...|.|.|.|..::|   ..|...|
  Rat    65 ILDLHNKLRSQ------------VYPAASNMEYMTWDVELERSAESWAETCLWEH---GPTSLLP 114

  Fly   132 RVGECLAMMVPKYK-HTVHEALKKMFKIMFDE-------HLHIQDPRGLLQGFHPIR--DYVSSH 186
            .:|:.|.....:|: .|.|      .:..:||       :.|..||      :.|.|  ..|.:|
  Rat   115 SIGQNLGAHWGRYRPPTFH------VQAWYDEVRDFSYPYEHECDP------YCPFRCSGPVCTH 167

  Fly   187 FTIIVSDRVSRVGCGVAVGTNCRQGSSSNFCH-------------FLTC-YFDYDNVNGSYVYKA 237
            :|.:|....||:||.:            |.||             :|.| |....|..|...||.
  Rat   168 YTQVVWATSSRIGCAI------------NLCHNMNIWGQIWPKAVYLVCNYSPKGNWWGHAPYKH 220

  Fly   238 GKPASSC--SDWGTTKSKEFANLCYNNGN 264
            |||.|:|  |..|..:.    ||||..|:
  Rat   221 GKPCSACPPSFGGGCRE----NLCYKEGS 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43776NP_001261162.1 CAP_euk 64..225 CDD:349399 44/181 (24%)
Crispld1NP_001128435.1 CAP_CRISPLD1 62..207 CDD:349407 43/180 (24%)
LCCL 291..375 CDD:128866
LCCL 394..491 CDD:427521
Blue background indicates that the domain is not in the aligned region.

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