DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG43776 and glipr1a

DIOPT Version :9

Sequence 1:	NP_001261162.1	Gene:	CG43776 / 14462630	FlyBaseID:	FBgn0264298	Length:	270	Species:	Drosophila melanogaster
Sequence 2:	XP_017210734.1	Gene:	glipr1a / 108179203	ZFINID:	ZDB-GENE-110309-2	Length:	269	Species:	Danio rerio

Alignment Length:	200	Identity:	52/200 - (26%)
Similarity:	75/200 - (37%)	Gaps:	51/200 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly    86 SENRTFTQ--AKRMRQILWDSELAYMARSHASTVSFQHT-KCRSTVR----FPRVGECLAMMVPK 143
            ::||:...  |..||.:.||:.||..||:.|....|:|. ..|...|    |..|||.:....|.
Zfish    40 NQNRSSVSPTAANMRYMTWDAALAVTARAWARFCLFKHNIHLREAKRVHPTFTTVGENIWAGAPY 104

  Fly   144 YKHTVHEALKKMFKIMFDEHLHIQDPRGLLQGFHPIRDY-----------VSSHFTIIVSDRVSR 197
            .:.||..|                    :....:.::||           |..|:|.:|.....:
Zfish   105 SRFTVKSA--------------------VFSWVNELKDYNYNNNQCNDKKVCGHYTQVVWADSYK 149

  Fly   198 VGCGVAVGTNCRQG-SSSNFCH-----FLTCYFDYDNVNGSYVYKAGKPASSCSDWGTTKSKEFA 256
            |||.|   ..|..| :.::|.:     |:..|....|..|...||.|...|.|.  |:.|.:.
Zfish   150 VGCAV---QTCPNGVAETHFSNIQGVIFVCNYATAGNFAGRSPYKQGASCSGCG--GSDKCER-- 207

  Fly   257 NLCYN 261
            |||.|
Zfish   208 NLCRN 212

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG43776	NP_001261162.1	SCP_euk	64..225	CDD:240180	39/162 (24%)
glipr1a	XP_017210734.1	None

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1528782at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X35
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.920