DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43776 and LOC100536500

DIOPT Version :9

Sequence 1:NP_001261162.1 Gene:CG43776 / 14462630 FlyBaseID:FBgn0264298 Length:270 Species:Drosophila melanogaster
Sequence 2:XP_017207056.1 Gene:LOC100536500 / 100536500 -ID:- Length:245 Species:Danio rerio


Alignment Length:220 Identity:51/220 - (23%)
Similarity:78/220 - (35%) Gaps:56/220 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 IVPDIPKLRTEILRIINNFRNQFASGAFRTSENRTFTQAKRMRQILWDSELAYMARSHASTVSFQ 120
            :..::..::.||:.:.|.||.     |.:.|       |..|.::.|...:|..||...:     
Zfish    32 VCTELSSVQQEIVDVHNAFRR-----AVQPS-------ASNMLKMSWSDAVAESARGWIN----- 79

  Fly   121 HTKCRSTVRFP--------RVGECLAMMVPKYKHTVHEALKKMFKIMFDEHLHIQDPRGLLQGFH 177
              ||..|...|        .:||.|      :|.|...:...:......|..:.:.|.|.:.|  
Zfish    80 --KCNMTHGPPSSRMLNGYEMGENL------FKATGISSWTSVVDAWHSEVNNYKYPIGSING-- 134

  Fly   178 PIRDYVSSHFTIIVSDRVSRVGCGVAVGTNCRQGSSSNF---CHFLTCYFDYDNVNGSYVYKAGK 239
                ..:.|:|.:|......|||.|   |.|    .||:   ||    |:...|......|..|.
Zfish   135 ----QATGHYTQVVWYSSYEVGCAV---TQC----GSNYFYGCH----YYRAGNFRTVPPYSLGS 184

  Fly   240 PASSCSDWGTTKSKEFANLC-YNNG 263
            |.:||.:  ..:.....|.| |.||
Zfish   185 PCASCPN--NCEDNLCTNACPYING 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43776NP_001261162.1 SCP_euk 64..225 CDD:240180 40/171 (23%)
LOC100536500XP_017207056.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585632
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X35
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.850

Return to query results.
Submit another query.