DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG43776 and r3hdml

DIOPT Version :9

Sequence 1:	NP_001261162.1	Gene:	CG43776 / 14462630	FlyBaseID:	FBgn0264298	Length:	270	Species:	Drosophila melanogaster
Sequence 2:	XP_017953344.1	Gene:	r3hdml / 100492715	XenbaseID:	XB-GENE-1011048	Length:	253	Species:	Xenopus tropicalis

Alignment Length:	237	Identity:	59/237 - (24%)
Similarity:	93/237 - (39%)	Gaps:	66/237 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly    65 TEILRIINNFRNQ----FASGAFRTSENR--------------------TFTQAKRMRQILWDSE 105
            ||:|.:.|  |||    |.||..|....|                    .|..|..|..::||..
Frog    30 TELLSLSN--RNQTEHMFGSGIPRIRRKRYISPRDMSALLDYHNQVRSKVFPPAANMEYMVWDER 92

  Fly   106 LAYMARSHASTVSFQHTKCRSTVRFPRVGECLAMMVPKYKHTVHEALKKMFKIMFDEHLHIQDPR 170
            ||..|.|.|:...:.|.. ...:|:  :|:.|::...:|:..|     .:.|..:||..|...|
Frog    93 LAKSAESWANQCKWDHGP-NQLMRY--IGQNLSVHSGRYRSIV-----DLVKGWYDERQHYSFP- 148

  Fly   171 GLLQGFHP----------IRDYVSSHFTIIVSDRVSRVGCGVAVGTNCR-QGSSSNFCHFLTCYF 224
                  ||          ....|.:|:|.:|....:|:||.|.:.||.. .||:.....:|.|.:
Frog   149 ------HPRECNPSCPNKCTGAVCTHYTQMVWASSNRIGCAVNICTNINVWGSTWRQASYLVCNY 207

  Fly   225 DYDNVNGSYV----YKAGKPASSCSDWGTTKSKEFANLCYNN 262
               ::.|:::    ||.|:|.|:|       ...:..:|.||
Frog   208 ---SIKGNWIGEAPYKLGRPCSAC-------PPSYGGVCSNN 239

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG43776	NP_001261162.1	SCP_euk	64..225	CDD:240180	49/194 (25%)
r3hdml	XP_017953344.1	CAP_R3HDML	63..208	CDD:349409	37/162 (23%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1528782at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10334
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X35
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	3.110