DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43742 and CG4815

DIOPT Version :10

Sequence 1:NP_001261130.1 Gene:CG43742 / 14462622 FlyBaseID:FBgn0263999 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_651607.1 Gene:CG4815 / 43360 FlyBaseID:FBgn0039568 Length:265 Species:Drosophila melanogaster


Alignment Length:226 Identity:52/226 - (23%)
Similarity:89/226 - (39%) Gaps:70/226 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 LYNNSEFFCGGSLIHKQYVLTAAHCVRDLDEVTVHL-----------GEN-NRSCPIPVCKHVLR 102
            |:|..:..|..:|:..:::||||||..:|:....|:           |.| |::..|        
  Fly    53 LFNGRKLVCSATLLTPRHILTAAHCFENLNRSKFHVIGGKSAEFTWHGNNFNKNKLI-------- 109

  Fly   103 LNAKVILHPNFHGNIFLNDIALLR----LEREVIFEAHI-RPICIILDEDVTSNNQNNFTAYGWG 162
               :|.:||.:....|:.|:|:.:    |..:.|..|.: |.:.         :.::...|.|||
  Fly   110 ---RVQIHPKYAKMKFIADVAVAKTKYPLRSKYIGYAQLCRSVL---------HPRDKLIAAGWG 162

  Fly   163 KTEHGNISD-----VLSFIDLVRLPKSMCYQNI------NTICAGSTSGDT-CESDSGGPLI--- 212
              ..|.:.|     ....:.:..:.|..|.:.:      |.||||:.:..| |..||||||:   
  Fly   163 --FEGGVWDESRKKTFRSMKVGIVSKRDCEKQLDRKMPPNIICAGAYNNKTLCFGDSGGPLLLGR 225

  Fly   213 ------------GNFVHRGKSRDILFGITSY 231
                        ||    .:..|:..|:..|
  Fly   226 QVCGINTWTFKCGN----NEKPDVYMGVRYY 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43742NP_001261130.1 Tryp_SPc 34..253 CDD:214473 52/226 (23%)
Tryp_SPc 273..467 CDD:473915
CG4815NP_651607.1 Tryp_SPc 49..259 CDD:473915 52/226 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.