DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43742 and grass

DIOPT Version :10

Sequence 1:NP_001261130.1 Gene:CG43742 / 14462622 FlyBaseID:FBgn0263999 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_651543.1 Gene:grass / 43273 FlyBaseID:FBgn0039494 Length:377 Species:Drosophila melanogaster


Alignment Length:275 Identity:91/275 - (33%)
Similarity:137/275 - (49%) Gaps:49/275 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 DEN--CKVKITYRVANGHTAITSQ--FMAAL----YNNSEFFCGGSLIHKQYVLTAAHCVRDL-- 78
            |||  |...::.||:||:....|.  :||.|    :..|.|.|||::|.::|:|||||||..|  
  Fly   106 DENFDCGNFLSQRVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVHGLQN 170

  Fly    79 DEVTVHLGEN-------------NRSCPIPVC-----KHVLRLNAKVILHPNFHGNIFLNDIALL 125
            |...:.|||:             .:.|..||.     ||        ::|..:.....::|||||
  Fly   171 DLYEIRLGEHRISTEEDCRQQGRKKKCAPPVVNVGIEKH--------LIHEKYDARHIMHDIALL 227

  Fly   126 RLEREVIFEAHIRPICIILDEDVTSNNQNNFTAY--GWGKTEHGNISDVLSFIDLVRLPKSMCYQ 188
            :|.|.|.|:.||:|||:.:.:::....:...|.:  |||.||:|:.||||...::...|:|.|.|
  Fly   228 KLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTENGSSSDVLLQANVPLQPRSACSQ 292

  Fly   189 ------NINTICAGSTS-GDTCESDSGGPLIGNFVHRGK--SRDILFGITSYGDAECS--GLFGV 242
                  .::.:|.|... .|:|:.||||||.....:.|:  .:.:.|||.|.|...|.  .|.|:
  Fly   293 AYRRAVPLSQLCVGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGL 357

  Fly   243 YTDVNAYKSWIASVV 257
            ||:|..|..||...:
  Fly   358 YTNVGEYVQWITDTM 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43742NP_001261130.1 Tryp_SPc 34..253 CDD:214473 85/257 (33%)
Tryp_SPc 273..467 CDD:473915
grassNP_651543.1 CLIP 32..90 CDD:197829
Tryp_SPc 121..371 CDD:238113 85/257 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.