DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43742 and modSP

DIOPT Version :10

Sequence 1:NP_001261130.1 Gene:CG43742 / 14462622 FlyBaseID:FBgn0263999 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster


Alignment Length:299 Identity:74/299 - (24%)
Similarity:113/299 - (37%) Gaps:74/299 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 YQNAFAQLLDENCKVKIT---------YRVANGHTAITSQFMAALYNNSE---FFCGGSLIHKQY 67
            |.|...|..:::|....|         |.:.|  |.:.......:::|.:   |.|||||:....
  Fly   346 YWNRGRQRCEQDCGQLATPIKQFSSGGYTINN--TVVPWHVGLYVWHNEKDYHFQCGGSLLTPDL 408

  Fly    68 VLTAAHCVRDLDEVTVHLGENNRSCPIPVCKHVLRLNAK--------------------VILHPN 112
            |:||||||.|         |..|   :|......|:.|.                    :.:.|.
  Fly   409 VITAAHCVYD---------EGTR---LPYSYDTFRVIAAKFYRNYGETTPEEKRRDVRLIEIAPG 461

  Fly   113 FHGNI--FLNDIALLRLEREVIFEAHIRPICIIL-----DEDVTSNNQNNFTAYGWG-KTEHGNI 169
            :.|..  :..|:|||.|:........|||||:..     .|.||.:.|..|.  ||. :.:|   
  Fly   462 YKGRTENYYQDLALLTLDEPFELSHVIRPICVTFASFAEKESVTDDVQGKFA--GWNIENKH--- 521

  Fly   170 SDVLSFIDLVRLPKSMCYQNINTICAGS----TSGDT--CESDSGGPLIGN-----FVHRGKSRD 223
              .|.|:..|....|:|.:|:..|.|..    |.|.:  |:.||||.....     |.....:|.
  Fly   522 --ELQFVPAVSKSNSVCRRNLRDIQADKFCIFTQGKSLACQGDSGGGFTSELPTNAFSTWNTARH 584

  Fly   224 ILFGITSYGD--AECSGLFGVYTDVNAYKSWIASVVLES 260
            .|||:.|...  .:|:....|.|::..::..|.:.:..|
  Fly   585 FLFGVISNAPNADQCAHSLTVMTNIQHFEDMILNAMNRS 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43742NP_001261130.1 Tryp_SPc 34..253 CDD:214473 66/262 (25%)
Tryp_SPc 273..467 CDD:473915
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Tryp_SPc 371..616 CDD:214473 67/265 (25%)
Blue background indicates that the domain is not in the aligned region.

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