DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43742 and Jon66Cii

DIOPT Version :10

Sequence 1:NP_001261130.1 Gene:CG43742 / 14462622 FlyBaseID:FBgn0263999 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_648217.1 Gene:Jon66Cii / 38953 FlyBaseID:FBgn0035887 Length:262 Species:Drosophila melanogaster


Alignment Length:241 Identity:74/241 - (30%)
Similarity:111/241 - (46%) Gaps:47/241 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RVANGHTAITSQ--FMAALYNNSEFFCGGSLIHKQYVLTAAHCVRDLDEVTVHLGENNRSCPIPV 96
            |:.||:.|...:  :...|..:..::||||:|...:||||.||:.|.|.|||:.|.         
  Fly    39 RITNGYPAEEGKAPYTVGLGFSGGWWCGGSIIAHDWVLTAEHCIGDADSVTVYFGA--------- 94

  Fly    97 CKHVLRLNAKVILHPNFHGNIFLN---DIALLRLEREVIFEAHIRPICIILDEDVTSNNQ--NNF 156
               ..|.||: ..|...:||...:   ||||:|:       .|:....::...::.|.|.  |::
  Fly    95 ---TWRTNAQ-FTHWVGNGNFIKHSSADIALIRI-------PHVDFWHMVNKVELPSYNDRYNDY 148

  Fly   157 -----TAYGWGKTEHGN-ISDVLSFIDLVRLPKSMC---YQNI--NTICAGSTSG-DTCESDSGG 209
                 .|.|||.|..|: :.|.|..:||..:..|.|   |.::  |.:|..:..| .||..||||
  Fly   149 NEWWAVACGWGGTYDGSPLPDYLQCVDLQIIHNSECSGYYGSVGDNILCVRTPDGKSTCGGDSGG 213

  Fly   210 PLIGNFVHRGKSRDILFGITSYGD-AEC-SGLFGVYTDVNAYKSWI 253
            ||:   .|.|..   |.|:|::|. |.| ||....:..|..:..||
  Fly   214 PLV---THDGTK---LVGVTNFGSVAGCQSGAPAGFQRVTYHLDWI 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43742NP_001261130.1 Tryp_SPc 34..253 CDD:214473 72/239 (30%)
Tryp_SPc 273..467 CDD:473915
Jon66CiiNP_648217.1 Tryp_SPc 40..256 CDD:238113 73/240 (30%)
Blue background indicates that the domain is not in the aligned region.

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