DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43742 and Gzmb

DIOPT Version :10

Sequence 1:NP_001261130.1 Gene:CG43742 / 14462622 FlyBaseID:FBgn0263999 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_612526.2 Gene:Gzmb / 171528 RGDID:620018 Length:248 Species:Rattus norvegicus


Alignment Length:254 Identity:73/254 - (28%)
Similarity:108/254 - (42%) Gaps:54/254 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 VANGHTA--ITSQFMAALYNNSEFF----CGGSLIHKQYVLTAAHCVRDLDEVTVHLGENN---- 89
            :..||.|  .:..:||.|....|:.    |||.||.:.:|||||||  ...::.|.||.:|    
  Rat    21 IIGGHEAKPHSRPYMAYLQIMDEYSGSKKCGGFLIREDFVLTAAHC--SGSKINVTLGAHNIKEQ 83

  Fly    90 --RSCPIPVCKHVLRLNAKVILHPNFHGNIFLNDIALLRLEREVIFEAHIRPICI------ILDE 146
              ....|||        .|:|.||.::.....|||.||:|:.:....:.::|:.:      :...
  Rat    84 EKMQQIIPV--------VKIIPHPAYNSKTISNDIMLLKLKSKAKRSSAVKPLNLPRRNVKVKPG 140

  Fly   147 DVTSNNQNNFTAYGWGKT-EHGNISDVLSFIDLVRLPKSMC-------YQNINTICAG--STSGD 201
            ||.      :.| ||||. ..|..||.|..::|.......|       :...|.||||  .....
  Rat   141 DVC------YVA-GWGKLGPMGKYSDTLQEVELTVQEDQKCESYLKNYFDKANEICAGDPKIKRA 198

  Fly   202 TCESDSGGPLIGNFVHRGKSRDILFGITSYGDAECSGLFGVYTDVNAYKSWIASVVLES 260
            :...||||||:        .:.:..||.|||..:.| ....:|.|:.:.|||...:.:|
  Rat   199 SFRGDSGGPLV--------CKKVAAGIVSYGQNDGS-TPRAFTKVSTFLSWIKKTMKKS 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43742NP_001261130.1 Tryp_SPc 34..253 CDD:214473 70/245 (29%)
Tryp_SPc 273..467 CDD:473915
GzmbNP_612526.2 Tryp_SPc 21..244 CDD:238113 72/248 (29%)
Blue background indicates that the domain is not in the aligned region.

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