powered by:
Protein Alignment CG43668 and Lamp3
DIOPT Version :10
| Sequence 1: | NP_001261110.1 |
Gene: | CG43668 / 14462617 |
FlyBaseID: | FBgn0263743 |
Length: | 180 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001012015.1 |
Gene: | Lamp3 / 303801 |
RGDID: | 1307928 |
Length: | 408 |
Species: | Rattus norvegicus |
| Alignment Length: | 123 |
Identity: | 28/123 - (22%) |
| Similarity: | 51/123 - (41%) |
Gaps: | 34/123 - (27%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 8 LALLLQANTIAGQDYQVFGS-PGVQ----VIYPSSSQVQVIGGRHFLRNGLRRNLTINA------ 61
|:.::...|..|:|.....| |.|. |.:.|.::: |.:.:.||.| |.|.|
Rat 181 LSTIVSELTPTGKDRSTTSSVPLVPRPTFVTWSSPAKI----GTYEVLNGSR--LCIKAEMGIAL 239
Fly 62 --------NATSQNFQLISSLSN-----GNSGNTPLRNF----LRSLFGRQPNIQYVN 102
:||.::|.:..||:: |:..:....|| :...|.::.|:.||:
Rat 240 IVQEKGLDSATQRHFNIDPSLTHASGKCGSQNSNLFLNFQGGSVNVTFTKEENLYYVS 297
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| CG43668 | NP_001261110.1 |
None |
| Lamp3 | NP_001012015.1 |
Lamp |
216..358 |
CDD:460152 |
19/88 (22%) |
Return to query results.
Submit another query.
