DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgk1 and Rem2

DIOPT Version :10

Sequence 1:NP_725875.3 Gene:Rgk1 / 14462605 FlyBaseID:FBgn0264753 Length:1379 Species:Drosophila melanogaster
Sequence 2:NP_073176.2 Gene:Rem2 / 64626 RGDID:69081 Length:341 Species:Rattus norvegicus


Alignment Length:352 Identity:97/352 - (27%)
Similarity:149/352 - (42%) Gaps:102/352 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1058 GVVNRGDSL------KSRRSRSNNSV-----ASSNSSTEHLTTQQQLSAPASVSARTSLASSRES 1111
            ||..|..|:      :.||:::.:.:     |||:.|::.|.           |...:||..   
  Rat    62 GVPRRRGSMPVPYKHQLRRAQAVDELDWPPQASSSGSSDSLG-----------SGEAALAQK--- 112

  Fly  1112 STSNPGNGPYRVLMLGGPAVGKSSLVSQFMTSEYLHAYDTSIDDESGEKAVSVLLSGEESELIFI 1176
                  :|.::|::||...||||:|...|...:..:|::....:::.|:  .:::..||..||..
  Rat   113 ------DGVFKVMLLGESGVGKSTLAGTFGGLQGDNAHEMENSEDTYER--RIMVDKEEVTLIVY 169

  Fly  1177 D-------HGYTEMTPDECLTNYDPHGYCVIYSAADRSSFSVAEQVLQVLWTNQNIAQKAVILVS 1234
            |       .|:.:   |.||...|  .:.:::|..||.|||...:.|..|...:......||||.
  Rat   170 DIWEQGDAGGWLQ---DHCLQTGD--AFLIVFSVTDRRSFSKVPETLLRLRAGRPHHDLPVILVG 229

  Fly  1235 NKADLARSRLVTSEEGKAMATAYDCKFIETSVGINHNVDELLVGLLSQIRLKL-------ENPEK 1292
            ||:||||||.|:.|||:.:|....||.||||..::||..||..|.:.||||:.       :.||.
  Rat   230 NKSDLARSREVSLEEGRHLAGTLSCKHIETSAALHHNTRELFEGAVRQIRLRRGRGHAGGQRPEP 294

  Fly  1293 SRDLFRKRSIRKSKRRACSPLNAGCLNANTPLGPLGEAVATPPGSAQSSPRKYRGSRTSTSLKVK 1357
            |                            :|.||      .||           ..|.|.:.|.|
  Rat   295 S----------------------------SPDGP------APP-----------TRRESLTKKAK 314

  Fly  1358 GLLGRVWTRDSK-----SKSCENLHVL 1379
            ..|..:..|::|     |:||.:|.||
  Rat   315 RFLANLVPRNAKFFKQRSRSCHDLSVL 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rgk1NP_725875.3 DUF2967 16..899 CDD:402654
P-loop containing Nucleoside Triphosphate Hydrolases 1121..1379 CDD:476819 80/276 (29%)
Rem2NP_073176.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..72 4/9 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..106 6/32 (19%)
RGK 116..341 CDD:206715 80/276 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 282..309 9/71 (13%)
Blue background indicates that the domain is not in the aligned region.

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