Sequence 1: | NP_725875.3 | Gene: | Rgk1 / 14462605 | FlyBaseID: | FBgn0264753 | Length: | 1379 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001020924.1 | Gene: | Rem1 / 366232 | RGDID: | 1306560 | Length: | 297 | Species: | Rattus norvegicus |
Alignment Length: | 337 | Identity: | 107/337 - (31%) |
---|---|---|---|
Similarity: | 156/337 - (46%) | Gaps: | 85/337 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 1066 LKSRRSRSNNSVASSNSSTEHLTTQQQLSAPASVS---ARTSLASSRESSTSNPGNGP----YRV 1123
Fly 1124 LMLGGPAVGKSSLVSQFMTSEYLHAYDTSIDDESG---EKAVSVLLSGEESELIFIDHGYTE--- 1182
Fly 1183 --MTPDECLTNYDPHGYCVIYSAADRSSF-SVAEQVLQVLWTNQNIAQKAVILVSNKADLARSRL 1244
Fly 1245 VTSEEGKAMATAYDCKFIETSVGINHNVDELLVGLLSQIRLKLENPEKSRDLFRKRSIRKSKRRA 1309
Fly 1310 CSPLNAGCLNANTPLGPLGEAVATPPGSAQSSPRKYRGSRTSTSLKVKGLLGRVWTRD------- 1367
Fly 1368 SKSKSCENLHVL 1379 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rgk1 | NP_725875.3 | DUF2967 | 459..715 | CDD:288079 | |
P-loop_NTPase | 1121..1379 | CDD:304359 | 92/273 (34%) | ||
small_GTPase | 1121..1286 | CDD:197466 | 72/173 (42%) | ||
Rem1 | NP_001020924.1 | RGK | 81..297 | CDD:206715 | 92/273 (34%) |
small_GTPase | 81..245 | CDD:197466 | 72/173 (42%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D301527at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm8910 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR45775 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X743 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 6.020 |