DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgk1 and REM1

DIOPT Version :10

Sequence 1:NP_725875.3 Gene:Rgk1 / 14462605 FlyBaseID:FBgn0264753 Length:1379 Species:Drosophila melanogaster
Sequence 2:XP_005260461.1 Gene:REM1 / 28954 HGNCID:15922 Length:306 Species:Homo sapiens


Alignment Length:392 Identity:114/392 - (29%)
Similarity:165/392 - (42%) Gaps:113/392 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1009 QSVKMPGSRASGRPNQLCLP-----QQRSRVASMPNTGVEEEYYRLRHFSITGKGVVNRGDSLKS 1068
            |..|.|..|.:..|    ||     .|..|::::|:|  :.::.||             |.|   
Human     7 QEAKTPLHRRASTP----LPLSPRGHQPGRLSTVPST--QSQHPRL-------------GQS--- 49

  Fly  1069 RRSRSNNSVASSNSSTEHLTTQQQLSAPASVSARTSLASSRESSTSNPGNGPYRVLMLGGPAVGK 1133
                     ||.|.     .||:...||..       .||..|.:.......|||::||.|.|||
Human    50 ---------ASLNP-----PTQKPSPAPDD-------WSSESSDSEGSWEALYRVVLLGDPGVGK 93

  Fly  1134 SSLVSQFMTSEYLHAYDTSIDDESGEKAV----------SVLLSGEESELIFIDHGYTE-----M 1183
            :||.|.|...:     :..:.::.|:.|:          ::.:.||::.|:.:|....|     .
Human    94 TSLASLFAGKQ-----ERDLHEQLGDPALPSVAEDVYERTLTVDGEDTTLVVVDTWEAEKLDKSW 153

  Fly  1184 TPDECLTNYDPHGYCVIYSAADRSSF-SVAEQVLQVLWTNQNIAQKAVILVSNKADLARSRLVTS 1247
            :.:.||..  ...|.::||.|||.|| |.:|..:|:..|:| .....:|||.|||||||.|.|:.
Human   154 SQESCLQG--GSAYVIVYSIADRGSFESASELRIQLRRTHQ-ADHVPIILVGNKADLARCREVSV 215

  Fly  1248 EEGKAMATAYDCKFIETSVGINHNVDELLVGLLSQIRLKLENPEKSRDLFRKRSIRKSKRRACSP 1312
            |||:|.|..:||||||||..:.|||.||..|::.|:||:           |:.|..|.       
Human   216 EEGRACAVVFDCKFIETSATLQHNVAELFEGVVRQLRLR-----------RRDSAAKE------- 262

  Fly  1313 LNAGCLNANTPLGPLGEAVATPPGSAQSSPRKYRGSRTSTSLKVKGLLGRVWTRDSKSKSCENLH 1377
                      |..|      ..|.|.....|::....|:.|.:.:.|..|       ||||.||.
Human   263 ----------PPAP------RRPASLAQRARRFLARLTARSARRRALKAR-------SKSCHNLA 304

  Fly  1378 VL 1379
            ||
Human   305 VL 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rgk1NP_725875.3 DUF2967 16..899 CDD:402654
P-loop containing Nucleoside Triphosphate Hydrolases 1121..1379 CDD:476819 87/273 (32%)
REM1XP_005260461.1 RGK 81..306 CDD:206715 87/273 (32%)
Blue background indicates that the domain is not in the aligned region.

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