DRSC/TRiP Functional Genomics Resources

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Protein Alignment koko and CCNT1

DIOPT Version :10

Sequence 1:NP_732338.1 Gene:koko / 14462485 FlyBaseID:FBgn0264816 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_001231.2 Gene:CCNT1 / 904 HGNCID:1599 Length:726 Species:Homo sapiens


Alignment Length:233 Identity:58/233 - (24%)
Similarity:98/233 - (42%) Gaps:27/233 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KPIDYRKMNKPGVVPMYIFECAAKLKMKPLTAACAAIVFHRFFREVKASDYDEFLIAAGSLYLAG 87
            |.:.||:.     ....:.:...:|.:..||...|.:..|||:.....:.:....:|..:|:||.
Human    33 KELSYRQQ-----AANLLQDMGQRLNVSQLTINTAIVYMHRFYMIQSFTQFPGNSVAPAALFLAA 92

  Fly    88 KIKEDESVKIRDVINVAYCTLNRGNDPVDLNDE-YWSMRDAIVQAELLITRTLCFDLNIDLAHKY 151
            |: |::..|:..||.||:..|:......|...| |......:|..|.:|.:||.|:|.||..|  
Human    93 KV-EEQPKKLEHVIKVAHTCLHPQESLPDTRSEAYLQQVQDLVILESIILQTLGFELTIDHPH-- 154

  Fly   152 LLHYMKTLQDWVGTEVWNSVPIAK--AAASYL---QDFHHSANILKYKPTHVAIGCLSLALQTYG 211
             .|.:|..|         .|..:|  |..||.   ...|.:...|:|.|..||..|:.||.:...
Human   155 -THVVKCTQ---------LVRASKDLAQTSYFMATNSLHLTTFSLQYTPPVVACVCIHLACKWSN 209

  Fly   212 IQVPLTDESDESAMWYKPLVKDFTRENQWEIIENVIEV 249
            .::|:   |.:...|::.:....|.|...|:....:::
Human   210 WEIPV---STDGKHWWEYVDATVTLELLDELTHEFLQI 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kokoNP_732338.1 CYCLIN_CCNM_CCNQ_rpt1 32..142 CDD:410237 27/110 (25%)
CYCLIN_CCNM_CCNQ_rpt2 147..252 CDD:410238 24/108 (22%)
CCNT1NP_001231.2 CYCLIN_CCNT1_rpt1 10..147 CDD:410298 30/119 (25%)
CYCLIN_CCNT1_rpt2 151..259 CDD:410300 25/109 (23%)
Nuclear localization signal, and interaction with Tat-TAR RNA. /evidence=ECO:0000305|PubMed:9491887 253..270
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 360..385
Histidine-rich domain (HRD). /evidence=ECO:0000269|PubMed:29849146, ECO:0000269|PubMed:35393539 480..550
Disordered. /evidence=ECO:0000269|PubMed:29849146 487..650
Required for interaction with ZMYND8. /evidence=ECO:0000269|PubMed:30134174 527..570
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 688..726
Blue background indicates that the domain is not in the aligned region.

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